G1499518


Basic Information

Item Value
gene id G1499518
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 84878718 ~ 84879253 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1714328
AAAATATTTATTCAAGTAGTGACAGTGAATTCCATAATATTCTCATAATTTTACTAACAAAACAGTAAAATATTTACAAAGATAAAATGCCATAGAAGAGGCAGAAGTTACAGAAGGGCATCAAGATGCCAGACGACACAGTCAGAGAAGAAAGCCAAGTTATCCATAGCAGTGAGCAGTATAGTCAAGGCATTAAGCAAACGGCGTGTTCATTAGACAGCAAACTAAATAACGATGACTGTTGTTATGTGACCTAAATGAACACGACCGTGGCCACAGTACTGTGTAGGTGCTGGGAAACAGCCAACCAGGATTCATGAAAACACCATGACCAACGGTCCTCATTTGTTTTGCTCTGGGCTGTGAGACATGGCGGTGGGCGTCTTGGTCGATTTCTCCACCACCCAGGGATGGGCCAAAACACCCTGGATAGGGAGCCTGTGGAGGGGGTTGTGCTTCAGCAGTCTGTCTATTAGGTCTCTGCTGCCGGCACTAACATGGACTGGGTAAGTGAAC

Function

NR:

description
aurora kinase C-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1714328 True 516 lncRNA 0.45 2 84878718 84879253

Neighbor

gene id symbol gene type direction distance location
LOC110494760 ca119 coding downstream 147989 84724945 ~ 84730729 (-)
LOC110493281 LOC106593201 coding downstream 165321 84690785 ~ 84713397 (-)
LOC110494754 LOC106566081 coding downstream 832180 84032365 ~ 84046538 (-)
ccdc66 LOC106566088 coding downstream 1026661 83837851 ~ 83860046 (-)
si:dkey-261l7.2 LOC106566092 coding downstream 1249654 83608842 ~ 83629064 (-)
slc32a1 LOC106566112 coding upstream 2735 84881988 ~ 84887491 (-)
LOC110494769 LOC106566115 coding upstream 71267 84950520 ~ 84995003 (-)
LOC118940503 NA coding upstream 311544 85190797 ~ 85204675 (-)
shmt2 shmt2 coding upstream 421053 85300306 ~ 85342666 (-)
LOC110487407 NA coding upstream 437092 85316345 ~ 85318853 (-)
G1499517 NA non-coding downstream 7360 84871137 ~ 84871358 (-)
G1499494 LOC106566109 non-coding downstream 21250 84791186 ~ 84857468 (-)
G1499482 LOC106566108 non-coding downstream 33089 84844442 ~ 84845629 (-)
G1499487 NA non-coding downstream 108078 84770334 ~ 84770640 (-)
G1499472 NA non-coding downstream 123571 84754782 ~ 84755147 (-)
G1499523 NA non-coding upstream 437 84879690 ~ 84879956 (-)
G1499550 NA non-coding upstream 78232 84957485 ~ 84957874 (-)
G1499566 NA non-coding upstream 111195 84990448 ~ 84992243 (-)
G1499576 NA non-coding upstream 132083 85011336 ~ 85033259 (-)
G1499646 NA non-coding upstream 267634 85146887 ~ 85147762 (-)
G1498522 NA other downstream 821326 84051010 ~ 84057392 (-)
G1498442 NA other downstream 895824 83982341 ~ 83982894 (-)
G1498077 NA other downstream 1272965 83605243 ~ 83605753 (-)
G1496921 NA other downstream 2217080 82629246 ~ 82661638 (-)
G1496689 NA other downstream 2632731 82235128 ~ 82245987 (-)
G1499671 NA other upstream 341872 85221125 ~ 85223119 (-)
G1499684 NA other upstream 407403 85251788 ~ 85288117 (-)
LOC110494779 ddit3 other upstream 1360465 86236554 ~ 86242991 (-)
G1500834 LOC106566150 other upstream 1570426 86449679 ~ 86450734 (-)
LOC110493290 map3k12 other upstream 1918812 86798065 ~ 86880836 (-)

Expression


Co-expression Network