Gene
RNA
| Item | Value |
|---|---|
| gene id | G1499523 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 84879690 ~ 84879956 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1714333 | True | 267 | lncRNA | 0.39 | 1 | 84879690 | 84879956 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494760 | ca119 | coding | downstream | 148961 | 84724945 ~ 84730729 (-) |
| LOC110493281 | LOC106593201 | coding | downstream | 166293 | 84690785 ~ 84713397 (-) |
| LOC110494754 | LOC106566081 | coding | downstream | 833152 | 84032365 ~ 84046538 (-) |
| ccdc66 | LOC106566088 | coding | downstream | 1027633 | 83837851 ~ 83860046 (-) |
| si:dkey-261l7.2 | LOC106566092 | coding | downstream | 1250626 | 83608842 ~ 83629064 (-) |
| slc32a1 | LOC106566112 | coding | upstream | 2032 | 84881988 ~ 84887491 (-) |
| LOC110494769 | LOC106566115 | coding | upstream | 70564 | 84950520 ~ 84995003 (-) |
| LOC118940503 | NA | coding | upstream | 310841 | 85190797 ~ 85204675 (-) |
| shmt2 | shmt2 | coding | upstream | 420350 | 85300306 ~ 85342666 (-) |
| LOC110487407 | NA | coding | upstream | 436389 | 85316345 ~ 85318853 (-) |
| G1499518 | NA | non-coding | downstream | 437 | 84878718 ~ 84879253 (-) |
| G1499517 | NA | non-coding | downstream | 8332 | 84871137 ~ 84871358 (-) |
| G1499494 | LOC106566109 | non-coding | downstream | 22222 | 84791186 ~ 84857468 (-) |
| G1499482 | LOC106566108 | non-coding | downstream | 34061 | 84844442 ~ 84845629 (-) |
| G1499487 | NA | non-coding | downstream | 109050 | 84770334 ~ 84770640 (-) |
| G1499550 | NA | non-coding | upstream | 77529 | 84957485 ~ 84957874 (-) |
| G1499566 | NA | non-coding | upstream | 110492 | 84990448 ~ 84992243 (-) |
| G1499576 | NA | non-coding | upstream | 131380 | 85011336 ~ 85033259 (-) |
| G1499646 | NA | non-coding | upstream | 266931 | 85146887 ~ 85147762 (-) |
| G1499661 | NA | non-coding | upstream | 289218 | 85169174 ~ 85169732 (-) |
| G1498522 | NA | other | downstream | 822298 | 84051010 ~ 84057392 (-) |
| G1498442 | NA | other | downstream | 896796 | 83982341 ~ 83982894 (-) |
| G1498077 | NA | other | downstream | 1273937 | 83605243 ~ 83605753 (-) |
| G1496921 | NA | other | downstream | 2218052 | 82629246 ~ 82661638 (-) |
| G1496689 | NA | other | downstream | 2633703 | 82235128 ~ 82245987 (-) |
| G1499671 | NA | other | upstream | 341169 | 85221125 ~ 85223119 (-) |
| G1499684 | NA | other | upstream | 406700 | 85251788 ~ 85288117 (-) |
| LOC110494779 | ddit3 | other | upstream | 1359762 | 86236554 ~ 86242991 (-) |
| G1500834 | LOC106566150 | other | upstream | 1569723 | 86449679 ~ 86450734 (-) |
| LOC110493290 | map3k12 | other | upstream | 1918109 | 86798065 ~ 86880836 (-) |
