Gene
RNA
| Item | Value |
|---|---|
| gene id | G1499550 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 84957485 ~ 84957874 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1714367 | True | 241 | lncRNA | 0.42 | 2 | 84957485 | 84957874 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| slc32a1 | LOC106566112 | coding | downstream | 69994 | 84881988 ~ 84887491 (-) |
| LOC110494760 | ca119 | coding | downstream | 226756 | 84724945 ~ 84730729 (-) |
| LOC110493281 | LOC106593201 | coding | downstream | 244088 | 84690785 ~ 84713397 (-) |
| LOC110494754 | LOC106566081 | coding | downstream | 910947 | 84032365 ~ 84046538 (-) |
| ccdc66 | LOC106566088 | coding | downstream | 1105428 | 83837851 ~ 83860046 (-) |
| LOC118940503 | NA | coding | upstream | 232923 | 85190797 ~ 85204675 (-) |
| shmt2 | shmt2 | coding | upstream | 342432 | 85300306 ~ 85342666 (-) |
| LOC110487407 | NA | coding | upstream | 358471 | 85316345 ~ 85318853 (-) |
| LOC118940505 | NA | coding | upstream | 367279 | 85325153 ~ 85326712 (-) |
| LOC110494775 | LOC106566119 | coding | upstream | 386647 | 85344521 ~ 85425394 (-) |
| G1499523 | NA | non-coding | downstream | 77529 | 84879690 ~ 84879956 (-) |
| G1499518 | NA | non-coding | downstream | 78232 | 84878718 ~ 84879253 (-) |
| G1499517 | NA | non-coding | downstream | 86127 | 84871137 ~ 84871358 (-) |
| G1499494 | LOC106566109 | non-coding | downstream | 100017 | 84791186 ~ 84857468 (-) |
| G1499482 | LOC106566108 | non-coding | downstream | 111856 | 84844442 ~ 84845629 (-) |
| G1499566 | NA | non-coding | upstream | 32574 | 84990448 ~ 84992243 (-) |
| G1499576 | NA | non-coding | upstream | 53462 | 85011336 ~ 85033259 (-) |
| G1499646 | NA | non-coding | upstream | 189013 | 85146887 ~ 85147762 (-) |
| G1499661 | NA | non-coding | upstream | 211300 | 85169174 ~ 85169732 (-) |
| G1499681 | NA | non-coding | upstream | 258726 | 85216600 ~ 85217234 (-) |
| G1498522 | NA | other | downstream | 900093 | 84051010 ~ 84057392 (-) |
| G1498442 | NA | other | downstream | 974591 | 83982341 ~ 83982894 (-) |
| G1498077 | NA | other | downstream | 1351732 | 83605243 ~ 83605753 (-) |
| G1496921 | NA | other | downstream | 2295847 | 82629246 ~ 82661638 (-) |
| G1496689 | NA | other | downstream | 2711498 | 82235128 ~ 82245987 (-) |
| G1499671 | NA | other | upstream | 263251 | 85221125 ~ 85223119 (-) |
| G1499684 | NA | other | upstream | 328782 | 85251788 ~ 85288117 (-) |
| LOC110494779 | ddit3 | other | upstream | 1281844 | 86236554 ~ 86242991 (-) |
| G1500834 | LOC106566150 | other | upstream | 1491805 | 86449679 ~ 86450734 (-) |
| LOC110493290 | map3k12 | other | upstream | 1840191 | 86798065 ~ 86880836 (-) |
