Gene
RNA
| Item | Value |
|---|---|
| gene id | G1499681 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 85216600 ~ 85217234 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106933171 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1714516 | True | 635 | lncRNA | 0.39 | 1 | 85216600 | 85217234 |
85,214,800
85,215,200
85,215,600
85,216,000
85,216,400
85,216,800
85,217,200
85,217,600
85,218,000
85,218,400
85,218,800
85,219,200
85,219,600
85,220,000
NC_048581.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118940503 | NA | coding | downstream | 11925 | 85190797 ~ 85204675 (-) |
| LOC110494769 | LOC106566115 | coding | downstream | 221597 | 84950520 ~ 84995003 (-) |
| slc32a1 | LOC106566112 | coding | downstream | 329109 | 84881988 ~ 84887491 (-) |
| LOC110494760 | ca119 | coding | downstream | 485871 | 84724945 ~ 84730729 (-) |
| LOC110493281 | LOC106593201 | coding | downstream | 503203 | 84690785 ~ 84713397 (-) |
| shmt2 | shmt2 | coding | upstream | 83072 | 85300306 ~ 85342666 (-) |
| LOC110487407 | NA | coding | upstream | 99111 | 85316345 ~ 85318853 (-) |
| LOC118940505 | NA | coding | upstream | 107919 | 85325153 ~ 85326712 (-) |
| LOC110494775 | LOC106566119 | coding | upstream | 127287 | 85344521 ~ 85425394 (-) |
| LOC110494776 | LOC106566127 | coding | upstream | 492967 | 85710201 ~ 85713130 (-) |
| G1499661 | NA | non-coding | downstream | 46868 | 85169174 ~ 85169732 (-) |
| G1499646 | NA | non-coding | downstream | 68838 | 85146887 ~ 85147762 (-) |
| G1499576 | NA | non-coding | downstream | 183341 | 85011336 ~ 85033259 (-) |
| G1499566 | NA | non-coding | downstream | 224357 | 84990448 ~ 84992243 (-) |
| G1499550 | NA | non-coding | downstream | 258726 | 84957485 ~ 84957874 (-) |
| G1499682 | NA | non-coding | upstream | 75 | 85217309 ~ 85217771 (-) |
| G1499672 | NA | non-coding | upstream | 6351 | 85223585 ~ 85224065 (-) |
| G1499669 | NA | non-coding | upstream | 8872 | 85226106 ~ 85227280 (-) |
| G1499673 | NA | non-coding | upstream | 11320 | 85228554 ~ 85229705 (-) |
| G1499667 | LOC106566122 | non-coding | upstream | 22646 | 85239880 ~ 85241797 (-) |
| G1498522 | NA | other | downstream | 1159208 | 84051010 ~ 84057392 (-) |
| G1498442 | NA | other | downstream | 1233706 | 83982341 ~ 83982894 (-) |
| G1498077 | NA | other | downstream | 1610847 | 83605243 ~ 83605753 (-) |
| G1496921 | NA | other | downstream | 2554962 | 82629246 ~ 82661638 (-) |
| G1496689 | NA | other | downstream | 2970613 | 82235128 ~ 82245987 (-) |
| G1499671 | NA | other | upstream | 3891 | 85221125 ~ 85223119 (-) |
| G1499684 | NA | other | upstream | 69422 | 85251788 ~ 85288117 (-) |
| LOC110494779 | ddit3 | other | upstream | 1022484 | 86236554 ~ 86242991 (-) |
| G1500834 | LOC106566150 | other | upstream | 1232445 | 86449679 ~ 86450734 (-) |
| LOC110493290 | map3k12 | other | upstream | 1580831 | 86798065 ~ 86880836 (-) |
