G1499673


Basic Information

Item Value
gene id G1499673
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 85228554 ~ 85229705 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1714507
TTCAAAAGTCAGTCTGTCTTTCTTTCACAGGAAGTGGATGCGTGCATGGTTAAACCACATGACAAACAAGTCTTAAACGTAACTTTCTCACCTAGCTAGCTCTTAGATTCTGATTTGAATACCACTATGCTCTCTTTTACAACCCCGTTGTAGCAATCTGCCTCGGGAATTTACACAGTTAGTGTGAGAGCTGGCAAGCAACCATTCAAAACAACCTATTGCTAGGGTTACAACAGTACTCCATAACTCCTTACTACCATCCCCATTAAACATTAACCAGGCAGGGGAGTTATTTGATCCTGGTGAAGTCTGGAGCATCATTTAATGTCTATCTATAAAATTAAAATGACCTAGGAAATATATATCTGTTTGACgtgttttaaaataaaaaaaatacaaatttttATAGTagaacccaacacacacacacacgggaaactgttgatctaaaaaaaaacagcaacgttgcagttcttgacacactcaaaccagtgggcctggcaactactaccataccctagtcaaaggcacttaaatatgttgtcttgcccattcaccctctgaatggcacatatacacaatacatgtctcaattgtctcaaggtttaaaaatccttcttaaacctgtctcctccccttcatctacactaattgaagtgaATTTaccaggtgacatcaataagggatcatagcgttcacctggtcagtctgtcatggaacgACCAGAGCAAATAAAATCTTACTGCTGAAACAACATTACATAGTCTCAACCATATTCCcacttcttgtttttttaaattatgttatAGAGCATGAAAATAGGATGTTACCCAATACGTGAAAGGCCACAGTCAGTCAATCCCCACAACGTGCAGTCTCCGCAAACAACTCGCAAACAACTCACAAACAACTCCGTAAACAACTCACAAACAACTCACAAACAACTCACAAACAACTCCGCAAACAACTCACAAACAACTCACAAACAACTCACAAACAACTCCGCAAACAACTCACAAACAACTCCGCAAACAACTCACAAACAACTCACAAACAACTCACAAACAACTGTGCAAACATCTCACAAAAAACTCCGCAAACAACTCACAAACAACTCCGTAAACAACTCACAAACAACTCACAAACAACTCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1714507 True 1152 lncRNA 0.39 1 85228554 85229705

Neighbor

gene id symbol gene type direction distance location
LOC118940503 NA coding downstream 23879 85190797 ~ 85204675 (-)
LOC110494769 LOC106566115 coding downstream 233551 84950520 ~ 84995003 (-)
slc32a1 LOC106566112 coding downstream 341063 84881988 ~ 84887491 (-)
LOC110494760 ca119 coding downstream 497825 84724945 ~ 84730729 (-)
LOC110493281 LOC106593201 coding downstream 515157 84690785 ~ 84713397 (-)
shmt2 shmt2 coding upstream 70601 85300306 ~ 85342666 (-)
LOC110487407 NA coding upstream 86640 85316345 ~ 85318853 (-)
LOC118940505 NA coding upstream 95448 85325153 ~ 85326712 (-)
LOC110494775 LOC106566119 coding upstream 114816 85344521 ~ 85425394 (-)
LOC110494776 LOC106566127 coding upstream 480496 85710201 ~ 85713130 (-)
G1499669 NA non-coding downstream 1274 85226106 ~ 85227280 (-)
G1499672 NA non-coding downstream 4489 85223585 ~ 85224065 (-)
G1499682 NA non-coding downstream 10783 85217309 ~ 85217771 (-)
G1499681 NA non-coding downstream 11320 85216600 ~ 85217234 (-)
G1499661 NA non-coding downstream 58822 85169174 ~ 85169732 (-)
G1499667 LOC106566122 non-coding upstream 10175 85239880 ~ 85241797 (-)
G1499684 NA non-coding upstream 22083 85251788 ~ 85288117 (-)
G1499696 NA non-coding upstream 24230 85253935 ~ 85254752 (-)
G1499711 NA non-coding upstream 52146 85281851 ~ 85282763 (-)
G1499721 NA non-coding upstream 113863 85343568 ~ 85376275 (-)
G1499671 NA other downstream 5435 85221125 ~ 85223119 (-)
G1498522 NA other downstream 1171162 84051010 ~ 84057392 (-)
G1498442 NA other downstream 1245660 83982341 ~ 83982894 (-)
G1498077 NA other downstream 1622801 83605243 ~ 83605753 (-)
G1496921 NA other downstream 2566916 82629246 ~ 82661638 (-)
LOC110494779 ddit3 other upstream 1010013 86236554 ~ 86242991 (-)
G1500834 LOC106566150 other upstream 1219974 86449679 ~ 86450734 (-)
LOC110493290 map3k12 other upstream 1568360 86798065 ~ 86880836 (-)
G1501650 LOC106566166 other upstream 1904353 87134058 ~ 87166800 (-)

Expression


Co-expression Network