G1499721


Basic Information

Item Value
gene id G1499721
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 85343568 ~ 85376275 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1714606
ctctctctctctctttatctctctctctctcgctctctctctctgtctctctttatctctctctctctctctttatctctctctctctctctctctctctctctctctctctctctctctctctctctctctcgctctctctctctctctctctctttatctctctctctctctctctctctctctctctctctctctttatctctctctctctctctctctctctctctctctgtctctctttatctctctctctctttatctctctctctctctctctctctctctctctctttatctctctctctctctctctctctctctttatctctctctctctctctctctctctctcgctctctctctctctctctctctctctctctctctctctgtgtctctctctctctctctctctctctctctctctctctctctctctctctctctctctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1714606 True 455 lncRNA 0.47 4 85343568 85376275

Neighbor

gene id symbol gene type direction distance location
shmt2 shmt2 coding downstream 902 85300306 ~ 85342666 (-)
LOC118940505 NA coding downstream 16856 85325153 ~ 85326712 (-)
LOC110487407 NA coding downstream 24715 85316345 ~ 85318853 (-)
LOC118940503 NA coding downstream 138893 85190797 ~ 85204675 (-)
LOC110494769 LOC106566115 coding downstream 348565 84950520 ~ 84995003 (-)
LOC110494776 LOC106566127 coding upstream 333926 85710201 ~ 85713130 (-)
LOC110493286 LOC106566136 coding upstream 742300 86118575 ~ 86183605 (-)
LOC110494779 ddit3 coding upstream 860279 86236554 ~ 86242991 (-)
dctn2 LOC106566142 coding upstream 872957 86249232 ~ 86276059 (-)
igsf8 igsf8 coding upstream 1164524 86540799 ~ 86555989 (-)
G1499684 NA non-coding downstream 55451 85251788 ~ 85288117 (-)
G1499711 NA non-coding downstream 60805 85281851 ~ 85282763 (-)
G1499696 NA non-coding downstream 88816 85253935 ~ 85254752 (-)
G1499667 LOC106566122 non-coding downstream 101771 85239880 ~ 85241797 (-)
G1499673 NA non-coding downstream 113863 85228554 ~ 85229705 (-)
G1499737 NA non-coding upstream 19643 85395918 ~ 85397768 (-)
G1499743 NA non-coding upstream 26747 85403022 ~ 85403400 (-)
G1499781 NA non-coding upstream 98965 85475240 ~ 85475490 (-)
G1499822 NA non-coding upstream 128561 85504836 ~ 85505044 (-)
G1499852 NA non-coding upstream 162187 85538462 ~ 85538662 (-)
G1499671 NA other downstream 120449 85221125 ~ 85223119 (-)
G1498522 NA other downstream 1286176 84051010 ~ 84057392 (-)
G1498442 NA other downstream 1360674 83982341 ~ 83982894 (-)
G1498077 NA other downstream 1737815 83605243 ~ 83605753 (-)
G1500834 LOC106566150 other upstream 1073404 86449679 ~ 86450734 (-)
LOC110493290 map3k12 other upstream 1421790 86798065 ~ 86880836 (-)
G1501650 LOC106566166 other upstream 1757783 87134058 ~ 87166800 (-)
G1501745 NA other upstream 2018505 87394780 ~ 87395835 (-)

Expression


Co-expression Network