G1499828


Basic Information

Item Value
gene id G1499828
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 85511818 ~ 85512828 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1714717
cctgtatatagcctccacattgactctgtaccagtaacctctgtatatagcctccacattgactctgtaccgtaacaccctgtatatagcctccacattgactctgtaccggtacaccctgtatataacctccacattgactctgtaccagtactccctgtatatagtctccacattgactctgtaccgtaacaccctgtatatagcctccacattgactctgtatcggtaccccctatatatagcctccacattgactctgtaccggtaccccctgtatatagcctccacattgactctgtactggtaccccctgtatatagtctccacattgactctgtaccggtaccccctgtatatagcctccacattgactctgtacaggtacaccctgcatatagactccacattgactctgtactagtaccccctgtatatagcctccacattgactctgtacc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1714717 True 461 lncRNA 0.47 2 85511818 85512828

Neighbor

gene id symbol gene type direction distance location
LOC118940506 NA coding upstream 182048 85327147 ~ 85362000 (+)
LOC118940504 NA coding upstream 190854 85319403 ~ 85320964 (+)
LOC110494772 LOC105007909 coding upstream 223707 85269122 ~ 85288116 (+)
fam210b LOC106566122 coding upstream 270019 85229691 ~ 85241799 (+)
LOC118940502 ppp1r16b coding upstream 299491 85042173 ~ 85212327 (+)
LOC110493284 LOC106566126 coding downstream 217714 85730542 ~ 85824609 (+)
LOC118940162 NA coding downstream 237185 85750013 ~ 85750757 (+)
LOC110493285 LOC106566129 coding downstream 336224 85849052 ~ 86009441 (+)
LOC110494777 LOC106566131 coding downstream 579819 86092647 ~ 86102311 (+)
LOC118936559 LOC106566131 coding downstream 589523 86102351 ~ 86105937 (+)
G1499795 NA non-coding upstream 26177 85485434 ~ 85485641 (+)
G1499763 NA non-coding upstream 48148 85463467 ~ 85463670 (+)
G1499413 NA non-coding upstream 108448 85403019 ~ 85403370 (+)
G1499375 NA non-coding upstream 210710 85298567 ~ 85301108 (+)
G1499849 NA non-coding downstream 22085 85534913 ~ 85535135 (+)
G1499853 NA non-coding downstream 26863 85539691 ~ 85539893 (+)
G1499856 NA non-coding downstream 30699 85543527 ~ 85543815 (+)
G1499863 NA non-coding downstream 39710 85552538 ~ 85553100 (+)
G1499948 NA non-coding downstream 173287 85686115 ~ 85686503 (+)
G1499374 NA other upstream 218697 85291785 ~ 85293121 (+)
G1499347 NA other upstream 295745 85214793 ~ 85216073 (+)
G1499159 NA other upstream 700633 84810531 ~ 84811185 (+)
LOC110493283 LOC106566114 other upstream 719318 84789132 ~ 84793175 (+)
G1499923 LOC106566127 other downstream 112615 85625443 ~ 85711859 (+)
G1500198 NA other downstream 754500 86267328 ~ 86268175 (+)
G1500239 NA other downstream 869470 86382298 ~ 86383545 (+)
G1500170 LOC106566147 other downstream 1008002 86520830 ~ 86527030 (+)
G1501148 NA other downstream 1655711 87168539 ~ 87169007 (+)

Expression


Co-expression Network