G1500504


Basic Information

Item Value
gene id G1500504
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 85669647 ~ 85751343 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1715579
tctttatgtaatacatgtatcactagccactttaaactatgccactttgtttacataccctacattactcatctcatatgtatatactgtactcaataccatctactgcatcttgcctatgccgttctgtaccatcactcattcatatctttatgtacatattctttatccctttacacttgtgtgtataaggtagtagttttggaattgttagctagattacttgttggttattactgcattgtcggaactagaagcacaagcatttcgctacactcgcattaacatctgctaaccatgtgtatgtgacaaataaaatttgatttgatttgacatctataaattagcccaaacaactacctctccccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1715579 True 369 lncRNA 0.35 2 85669647 85751343

Neighbor

gene id symbol gene type direction distance location
LOC110494775 LOC106566119 coding downstream 244253 85344521 ~ 85425394 (-)
shmt2 shmt2 coding downstream 326981 85300306 ~ 85342666 (-)
LOC118940505 NA coding downstream 342935 85325153 ~ 85326712 (-)
LOC110487407 NA coding downstream 350794 85316345 ~ 85318853 (-)
LOC118940503 NA coding downstream 464972 85190797 ~ 85204675 (-)
LOC110493286 LOC106566136 coding upstream 367232 86118575 ~ 86183605 (-)
LOC110494779 ddit3 coding upstream 485211 86236554 ~ 86242991 (-)
dctn2 LOC106566142 coding upstream 497889 86249232 ~ 86276059 (-)
igsf8 igsf8 coding upstream 789456 86540799 ~ 86555989 (-)
sp7 sp7 coding upstream 854597 86605940 ~ 86610581 (-)
G1499852 NA non-coding downstream 130985 85538462 ~ 85538662 (-)
G1499822 NA non-coding downstream 164603 85504836 ~ 85505044 (-)
G1499781 NA non-coding downstream 194157 85475240 ~ 85475490 (-)
G1499743 NA non-coding downstream 266247 85403022 ~ 85403400 (-)
G1499737 NA non-coding downstream 271879 85395918 ~ 85397768 (-)
G1500557 NA non-coding upstream 24937 85776280 ~ 85778950 (-)
G1500565 NA non-coding upstream 44479 85795822 ~ 85827130 (-)
G1500587 NA non-coding upstream 80886 85832229 ~ 85834039 (-)
G1500624 NA non-coding upstream 173675 85925018 ~ 85925783 (-)
G1500627 NA non-coding upstream 181735 85933078 ~ 85933418 (-)
G1499684 NA other downstream 381530 85251788 ~ 85288117 (-)
G1499671 NA other downstream 446528 85221125 ~ 85223119 (-)
G1498522 NA other downstream 1612255 84051010 ~ 84057392 (-)
G1498442 NA other downstream 1686753 83982341 ~ 83982894 (-)
G1498077 NA other downstream 2063894 83605243 ~ 83605753 (-)
G1500834 LOC106566150 other upstream 698336 86449679 ~ 86450734 (-)
LOC110493290 map3k12 other upstream 1046722 86798065 ~ 86880836 (-)
G1501650 LOC106566166 other upstream 1382715 87134058 ~ 87166800 (-)
G1501745 NA other upstream 1643437 87394780 ~ 87395835 (-)

Expression


Co-expression Network