Gene
RNA
| Item | Value |
|---|---|
| gene id | G1500517 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 85682675 ~ 85683104 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1715595 | True | 299 | lncRNA | 0.44 | 2 | 85682675 | 85683104 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494775 | LOC106566119 | coding | downstream | 257281 | 85344521 ~ 85425394 (-) |
| shmt2 | shmt2 | coding | downstream | 340009 | 85300306 ~ 85342666 (-) |
| LOC118940505 | NA | coding | downstream | 355963 | 85325153 ~ 85326712 (-) |
| LOC110487407 | NA | coding | downstream | 363822 | 85316345 ~ 85318853 (-) |
| LOC118940503 | NA | coding | downstream | 478000 | 85190797 ~ 85204675 (-) |
| LOC110494776 | LOC106566127 | coding | upstream | 27097 | 85710201 ~ 85713130 (-) |
| LOC110493286 | LOC106566136 | coding | upstream | 435471 | 86118575 ~ 86183605 (-) |
| LOC110494779 | ddit3 | coding | upstream | 553450 | 86236554 ~ 86242991 (-) |
| dctn2 | LOC106566142 | coding | upstream | 566128 | 86249232 ~ 86276059 (-) |
| igsf8 | igsf8 | coding | upstream | 857695 | 86540799 ~ 86555989 (-) |
| G1500513 | NA | non-coding | downstream | 353 | 85677329 ~ 85682322 (-) |
| G1499852 | NA | non-coding | downstream | 144013 | 85538462 ~ 85538662 (-) |
| G1499822 | NA | non-coding | downstream | 177631 | 85504836 ~ 85505044 (-) |
| G1499781 | NA | non-coding | downstream | 207185 | 85475240 ~ 85475490 (-) |
| G1499743 | NA | non-coding | downstream | 279275 | 85403022 ~ 85403400 (-) |
| G1500533 | NA | non-coding | upstream | 38507 | 85721611 ~ 85767996 (-) |
| G1500557 | NA | non-coding | upstream | 93176 | 85776280 ~ 85778950 (-) |
| G1500565 | NA | non-coding | upstream | 112718 | 85795822 ~ 85827130 (-) |
| G1500587 | NA | non-coding | upstream | 149125 | 85832229 ~ 85834039 (-) |
| G1500624 | NA | non-coding | upstream | 241914 | 85925018 ~ 85925783 (-) |
| G1499684 | NA | other | downstream | 394558 | 85251788 ~ 85288117 (-) |
| G1499671 | NA | other | downstream | 459556 | 85221125 ~ 85223119 (-) |
| G1498522 | NA | other | downstream | 1625283 | 84051010 ~ 84057392 (-) |
| G1498442 | NA | other | downstream | 1699781 | 83982341 ~ 83982894 (-) |
| G1498077 | NA | other | downstream | 2076922 | 83605243 ~ 83605753 (-) |
| G1500834 | LOC106566150 | other | upstream | 766575 | 86449679 ~ 86450734 (-) |
| LOC110493290 | map3k12 | other | upstream | 1114961 | 86798065 ~ 86880836 (-) |
| G1501650 | LOC106566166 | other | upstream | 1450954 | 87134058 ~ 87166800 (-) |
| G1501745 | NA | other | upstream | 1711676 | 87394780 ~ 87395835 (-) |
