Gene
RNA
| Item | Value |
|---|---|
| gene id | G1500533 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 85721611 ~ 85767996 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1715612 | True | 315 | lncRNA | 0.40 | 2 | 85721611 | 85767996 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494776 | LOC106566127 | coding | downstream | 8481 | 85710201 ~ 85713130 (-) |
| LOC110494775 | LOC106566119 | coding | downstream | 296217 | 85344521 ~ 85425394 (-) |
| shmt2 | shmt2 | coding | downstream | 378945 | 85300306 ~ 85342666 (-) |
| LOC118940505 | NA | coding | downstream | 394899 | 85325153 ~ 85326712 (-) |
| LOC110487407 | NA | coding | downstream | 402758 | 85316345 ~ 85318853 (-) |
| LOC110493286 | LOC106566136 | coding | upstream | 350579 | 86118575 ~ 86183605 (-) |
| LOC110494779 | ddit3 | coding | upstream | 468558 | 86236554 ~ 86242991 (-) |
| dctn2 | LOC106566142 | coding | upstream | 481236 | 86249232 ~ 86276059 (-) |
| igsf8 | igsf8 | coding | upstream | 772803 | 86540799 ~ 86555989 (-) |
| sp7 | sp7 | coding | upstream | 837944 | 86605940 ~ 86610581 (-) |
| G1500517 | NA | non-coding | downstream | 38507 | 85682675 ~ 85683104 (-) |
| G1500513 | NA | non-coding | downstream | 39289 | 85677329 ~ 85682322 (-) |
| G1499852 | NA | non-coding | downstream | 182949 | 85538462 ~ 85538662 (-) |
| G1499822 | NA | non-coding | downstream | 216567 | 85504836 ~ 85505044 (-) |
| G1499781 | NA | non-coding | downstream | 246121 | 85475240 ~ 85475490 (-) |
| G1500557 | NA | non-coding | upstream | 8284 | 85776280 ~ 85778950 (-) |
| G1500565 | NA | non-coding | upstream | 27826 | 85795822 ~ 85827130 (-) |
| G1500587 | NA | non-coding | upstream | 64233 | 85832229 ~ 85834039 (-) |
| G1500624 | NA | non-coding | upstream | 157022 | 85925018 ~ 85925783 (-) |
| G1500627 | NA | non-coding | upstream | 165082 | 85933078 ~ 85933418 (-) |
| G1499684 | NA | other | downstream | 433494 | 85251788 ~ 85288117 (-) |
| G1499671 | NA | other | downstream | 498492 | 85221125 ~ 85223119 (-) |
| G1498522 | NA | other | downstream | 1664219 | 84051010 ~ 84057392 (-) |
| G1498442 | NA | other | downstream | 1738717 | 83982341 ~ 83982894 (-) |
| G1498077 | NA | other | downstream | 2115858 | 83605243 ~ 83605753 (-) |
| G1500834 | LOC106566150 | other | upstream | 681683 | 86449679 ~ 86450734 (-) |
| LOC110493290 | map3k12 | other | upstream | 1030069 | 86798065 ~ 86880836 (-) |
| G1501650 | LOC106566166 | other | upstream | 1366062 | 87134058 ~ 87166800 (-) |
| G1501745 | NA | other | upstream | 1626784 | 87394780 ~ 87395835 (-) |
