G1500557


Basic Information

Item Value
gene id G1500557
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 85776280 ~ 85778950 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1715637
caacgtgtactggttgcTGGAGGGgggaaacaacgtgtactggttactggaggggtaaacaacgtgtactggttactggagggagaaacaacgtgtactggttactggagggataaacaacgtgtactggttactggagggagaaacaacgtgtactggttactggaggggtaaacaacgtgtactggttactggagggataaacaacgtgtactggttactggaggaagaaacaacgtgtactggttactggagtggtaaacaacgtgtactggttactggagggataaacaacgtgtactggttactggagggagaaacaacgtgtactggttactggagtggtaaacaacgtgtactggttactggagggataaacaacgtgtactggttactggaggggagaaacaacgtgtactggttactggagggataaacaacgtgtcctggttactggaggggagaacaacgtgtactggttactggaggaaTAAACAACGTgtcctggttactggagggataaacaacgtgtcctggttactggagggagaaacaacgtgtactggttactggagggataaacaacgtgtactggttactggagggataaacaacgtgtactggttactggaggg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1715637 True 635 lncRNA 0.48 2 85776280 85778950

Neighbor

gene id symbol gene type direction distance location
LOC110494776 LOC106566127 coding downstream 63150 85710201 ~ 85713130 (-)
LOC110494775 LOC106566119 coding downstream 350886 85344521 ~ 85425394 (-)
shmt2 shmt2 coding downstream 433614 85300306 ~ 85342666 (-)
LOC110493286 LOC106566136 coding upstream 339625 86118575 ~ 86183605 (-)
LOC110494779 ddit3 coding upstream 457604 86236554 ~ 86242991 (-)
dctn2 LOC106566142 coding upstream 470282 86249232 ~ 86276059 (-)
igsf8 igsf8 coding upstream 761849 86540799 ~ 86555989 (-)
sp7 sp7 coding upstream 826990 86605940 ~ 86610581 (-)
G1500533 NA non-coding downstream 8284 85721611 ~ 85767996 (-)
G1500504 NA non-coding downstream 24937 85669647 ~ 85751343 (-)
G1500517 NA non-coding downstream 93176 85682675 ~ 85683104 (-)
G1500513 NA non-coding downstream 93958 85677329 ~ 85682322 (-)
G1499852 NA non-coding downstream 237618 85538462 ~ 85538662 (-)
G1500565 NA non-coding upstream 16872 85795822 ~ 85827130 (-)
G1500587 NA non-coding upstream 53279 85832229 ~ 85834039 (-)
G1500624 NA non-coding upstream 146068 85925018 ~ 85925783 (-)
G1500627 NA non-coding upstream 154128 85933078 ~ 85933418 (-)
G1500652 NA non-coding upstream 213705 85992655 ~ 85993163 (-)
G1499684 NA other downstream 488163 85251788 ~ 85288117 (-)
G1499671 NA other downstream 553161 85221125 ~ 85223119 (-)
G1498522 NA other downstream 1718888 84051010 ~ 84057392 (-)
G1498442 NA other downstream 1793386 83982341 ~ 83982894 (-)
G1498077 NA other downstream 2170527 83605243 ~ 83605753 (-)
G1500834 LOC106566150 other upstream 670729 86449679 ~ 86450734 (-)
LOC110493290 map3k12 other upstream 1019115 86798065 ~ 86880836 (-)
G1501650 LOC106566166 other upstream 1355108 87134058 ~ 87166800 (-)
G1501745 NA other upstream 1615830 87394780 ~ 87395835 (-)

Expression


Co-expression Network