XLOC_003409 (CU459075.1)



Basic Information


Item Value
gene id XLOC_003409
gene name CU459075.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 21052228 ~ 21052344 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00006677
GCCTGCTACtgtagctctctgcaactctcacatggtcacccactaaaGTTAAGCAAGGCTGTGCCCAATCAGTACTTGGAAGAgagactacatgggaaagctagattgctgctGGAA

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000106000

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00006677 True 117 rRNA 0.49 1 21052228 21052344

Neighbor


gene id symbol gene type direction distance location
XLOC_003407 NA coding upstream 121904 20928241 ~ 20930324 (+)
XLOC_003406 CABZ01008730.1 coding upstream 146050 20896122 ~ 20906178 (+)
XLOC_003405 NA coding upstream 161347 20888110 ~ 20890881 (+)
XLOC_003404 cdh4 coding upstream 225475 20371179 ~ 20826753 (+)
XLOC_003403 fezf2 coding upstream 992821 20056732 ~ 20059407 (+)
XLOC_003410 prelp coding downstream 24528 21076872 ~ 21086254 (+)
XLOC_003411 il19l coding downstream 43995 21096339 ~ 21099783 (+)
XLOC_003412 il10 coding downstream 85604 21137948 ~ 21139503 (+)
XLOC_003413 BX321912.1 coding downstream 133125 21185469 ~ 21186684 (+)
XLOC_003414 NA coding downstream 250368 21302712 ~ 21306762 (+)
XLOC_003369 CR854846.2 misc upstream 4929146 16122786 ~ 16123082 (+)
XLOC_003318 CR450764.6 misc upstream 8340232 12711700 ~ 12711996 (+)
XLOC_003317 CR450764.16 misc upstream 8357965 12693967 ~ 12694263 (+)
XLOC_003316 CR450764.11 misc upstream 8366629 12685304 ~ 12685599 (+)
XLOC_003315 CR450764.18 misc upstream 8372200 12679732 ~ 12680028 (+)
XLOC_003402 BX276115.1 non-coding upstream 1019043 20033066 ~ 20033185 (+)
XLOC_003395 CU207354.2 non-coding upstream 2218982 18832913 ~ 18833246 (+)
XLOC_003394 NA non-coding upstream 2310125 18741027 ~ 18742103 (+)
XLOC_003415 NA non-coding downstream 354343 21406687 ~ 21408834 (+)
XLOC_003417 NA non-coding downstream 560327 21612671 ~ 21759025 (+)
XLOC_003418 CR812468.2 non-coding downstream 598178 21650522 ~ 21650638 (+)

Expression



Co-expression Network