Gene
RNA
| Item | Value |
|---|---|
| gene id | G1500587 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 85832229 ~ 85834039 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1715685 | False | 639 | lncRNA | 0.39 | 4 | 85832229 | 85834039 |
| TU1715684 | True | 319 | lncRNA | 0.40 | 3 | 85832726 | 85834039 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494776 | LOC106566127 | coding | downstream | 119099 | 85710201 ~ 85713130 (-) |
| LOC110494775 | LOC106566119 | coding | downstream | 406835 | 85344521 ~ 85425394 (-) |
| shmt2 | shmt2 | coding | downstream | 489563 | 85300306 ~ 85342666 (-) |
| LOC110493286 | LOC106566136 | coding | upstream | 284536 | 86118575 ~ 86183605 (-) |
| LOC110494779 | ddit3 | coding | upstream | 402515 | 86236554 ~ 86242991 (-) |
| dctn2 | LOC106566142 | coding | upstream | 415193 | 86249232 ~ 86276059 (-) |
| igsf8 | igsf8 | coding | upstream | 706760 | 86540799 ~ 86555989 (-) |
| sp7 | sp7 | coding | upstream | 771901 | 86605940 ~ 86610581 (-) |
| G1500565 | NA | non-coding | downstream | 5099 | 85795822 ~ 85827130 (-) |
| G1500557 | NA | non-coding | downstream | 53279 | 85776280 ~ 85778950 (-) |
| G1500533 | NA | non-coding | downstream | 64233 | 85721611 ~ 85767996 (-) |
| G1500504 | NA | non-coding | downstream | 80886 | 85669647 ~ 85751343 (-) |
| G1500624 | NA | non-coding | upstream | 90979 | 85925018 ~ 85925783 (-) |
| G1500627 | NA | non-coding | upstream | 99039 | 85933078 ~ 85933418 (-) |
| G1500652 | NA | non-coding | upstream | 158616 | 85992655 ~ 85993163 (-) |
| G1500666 | NA | non-coding | upstream | 198011 | 86032050 ~ 86032503 (-) |
| G1500671 | NA | non-coding | upstream | 207348 | 86041387 ~ 86042617 (-) |
| G1499684 | NA | other | downstream | 544112 | 85251788 ~ 85288117 (-) |
| G1499671 | NA | other | downstream | 609110 | 85221125 ~ 85223119 (-) |
| G1498522 | NA | other | downstream | 1774837 | 84051010 ~ 84057392 (-) |
| G1498442 | NA | other | downstream | 1849335 | 83982341 ~ 83982894 (-) |
| G1498077 | NA | other | downstream | 2226476 | 83605243 ~ 83605753 (-) |
| G1500834 | LOC106566150 | other | upstream | 615640 | 86449679 ~ 86450734 (-) |
| LOC110493290 | map3k12 | other | upstream | 964026 | 86798065 ~ 86880836 (-) |
| G1501650 | LOC106566166 | other | upstream | 1300019 | 87134058 ~ 87166800 (-) |
| G1501745 | NA | other | upstream | 1560741 | 87394780 ~ 87395835 (-) |
