Gene
RNA
| Item | Value |
|---|---|
| gene id | G1500624 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 85925018 ~ 85925783 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC110014125 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1715725 | True | 205 | lncRNA | 0.47 | 2 | 85925018 | 85925783 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494776 | LOC106566127 | coding | downstream | 211888 | 85710201 ~ 85713130 (-) |
| LOC110494775 | LOC106566119 | coding | downstream | 499624 | 85344521 ~ 85425394 (-) |
| shmt2 | shmt2 | coding | downstream | 582352 | 85300306 ~ 85342666 (-) |
| LOC110493286 | LOC106566136 | coding | upstream | 192792 | 86118575 ~ 86183605 (-) |
| LOC110494779 | ddit3 | coding | upstream | 310771 | 86236554 ~ 86242991 (-) |
| dctn2 | LOC106566142 | coding | upstream | 323449 | 86249232 ~ 86276059 (-) |
| igsf8 | igsf8 | coding | upstream | 615016 | 86540799 ~ 86555989 (-) |
| sp7 | sp7 | coding | upstream | 680157 | 86605940 ~ 86610581 (-) |
| G1500587 | NA | non-coding | downstream | 90979 | 85832229 ~ 85834039 (-) |
| G1500565 | NA | non-coding | downstream | 97888 | 85795822 ~ 85827130 (-) |
| G1500557 | NA | non-coding | downstream | 146068 | 85776280 ~ 85778950 (-) |
| G1500533 | NA | non-coding | downstream | 157022 | 85721611 ~ 85767996 (-) |
| G1500517 | NA | non-coding | downstream | 241914 | 85682675 ~ 85683104 (-) |
| G1500627 | NA | non-coding | upstream | 7295 | 85933078 ~ 85933418 (-) |
| G1500652 | NA | non-coding | upstream | 66872 | 85992655 ~ 85993163 (-) |
| G1500666 | NA | non-coding | upstream | 106267 | 86032050 ~ 86032503 (-) |
| G1500671 | NA | non-coding | upstream | 115604 | 86041387 ~ 86042617 (-) |
| G1500691 | NA | non-coding | upstream | 153928 | 86079711 ~ 86080424 (-) |
| G1499684 | NA | other | downstream | 636901 | 85251788 ~ 85288117 (-) |
| G1499671 | NA | other | downstream | 701899 | 85221125 ~ 85223119 (-) |
| G1498522 | NA | other | downstream | 1867626 | 84051010 ~ 84057392 (-) |
| G1498442 | NA | other | downstream | 1942124 | 83982341 ~ 83982894 (-) |
| G1498077 | NA | other | downstream | 2319265 | 83605243 ~ 83605753 (-) |
| G1500834 | LOC106566150 | other | upstream | 523896 | 86449679 ~ 86450734 (-) |
| LOC110493290 | map3k12 | other | upstream | 872282 | 86798065 ~ 86880836 (-) |
| G1501650 | LOC106566166 | other | upstream | 1208275 | 87134058 ~ 87166800 (-) |
| G1501745 | NA | other | upstream | 1468997 | 87394780 ~ 87395835 (-) |
