Gene
RNA
| Item | Value |
|---|---|
| gene id | G1500728 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 86158498 ~ 86159877 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1715857 | True | 262 | lncRNA | 0.46 | 3 | 86158498 | 86159877 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494776 | LOC106566127 | coding | downstream | 445368 | 85710201 ~ 85713130 (-) |
| LOC110494775 | LOC106566119 | coding | downstream | 733104 | 85344521 ~ 85425394 (-) |
| shmt2 | shmt2 | coding | downstream | 815832 | 85300306 ~ 85342666 (-) |
| LOC110494779 | ddit3 | coding | upstream | 76677 | 86236554 ~ 86242991 (-) |
| dctn2 | LOC106566142 | coding | upstream | 89355 | 86249232 ~ 86276059 (-) |
| igsf8 | igsf8 | coding | upstream | 380922 | 86540799 ~ 86555989 (-) |
| sp7 | sp7 | coding | upstream | 446063 | 86605940 ~ 86610581 (-) |
| tespa1 | LOC106566176 | coding | upstream | 513575 | 86673452 ~ 86697487 (-) |
| G1500717 | NA | non-coding | downstream | 21271 | 86135194 ~ 86137227 (-) |
| G1500710 | NA | non-coding | downstream | 46740 | 86110908 ~ 86111758 (-) |
| G1500702 | LOC106566131 | non-coding | downstream | 52028 | 86105132 ~ 86106470 (-) |
| G1500691 | NA | non-coding | downstream | 78074 | 86079711 ~ 86080424 (-) |
| G1500671 | NA | non-coding | downstream | 115881 | 86041387 ~ 86042617 (-) |
| G1500748 | NA | non-coding | upstream | 30981 | 86190858 ~ 86192397 (-) |
| G1500765 | NA | non-coding | upstream | 92618 | 86252495 ~ 86253248 (-) |
| G1500771 | NA | non-coding | upstream | 113675 | 86273552 ~ 86274126 (-) |
| G1500774 | NA | non-coding | upstream | 120583 | 86280460 ~ 86281241 (-) |
| G1500775 | NA | non-coding | upstream | 122012 | 86281889 ~ 86282188 (-) |
| G1499684 | NA | other | downstream | 870381 | 85251788 ~ 85288117 (-) |
| G1499671 | NA | other | downstream | 935379 | 85221125 ~ 85223119 (-) |
| G1498522 | NA | other | downstream | 2101106 | 84051010 ~ 84057392 (-) |
| G1498442 | NA | other | downstream | 2175604 | 83982341 ~ 83982894 (-) |
| G1498077 | NA | other | downstream | 2552745 | 83605243 ~ 83605753 (-) |
| G1500834 | LOC106566150 | other | upstream | 289802 | 86449679 ~ 86450734 (-) |
| LOC110493290 | map3k12 | other | upstream | 638188 | 86798065 ~ 86880836 (-) |
| G1501650 | LOC106566166 | other | upstream | 974181 | 87134058 ~ 87166800 (-) |
| G1501745 | NA | other | upstream | 1234903 | 87394780 ~ 87395835 (-) |
