Gene
RNA
| Item | Value |
|---|---|
| gene id | G1500187 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 86233653 ~ 86234108 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1715173 | True | 359 | lncRNA | 0.45 | 2 | 86233653 | 86234108 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118936559 | LOC106566131 | coding | upstream | 127716 | 86102351 ~ 86105937 (+) |
| LOC110494777 | LOC106566131 | coding | upstream | 131342 | 86092647 ~ 86102311 (+) |
| LOC110493285 | LOC106566129 | coding | upstream | 224212 | 85849052 ~ 86009441 (+) |
| LOC110493284 | LOC106566126 | coding | upstream | 411915 | 85730542 ~ 85824609 (+) |
| LOC118940507 | kif5a | coding | downstream | 42282 | 86276390 ~ 86452362 (+) |
| soat2 | LOC106566146 | coding | downstream | 233018 | 86467126 ~ 86511354 (+) |
| tarbp2 | tarbp2 | coding | downstream | 422570 | 86656678 ~ 86673359 (+) |
| sp1 | sp1 | coding | downstream | 465430 | 86699538 ~ 86711214 (+) |
| LOC110494798 | amhr2 | coding | downstream | 480993 | 86715101 ~ 86734187 (+) |
| G1500186 | NA | non-coding | upstream | 9838 | 86222168 ~ 86223815 (+) |
| G1500185 | NA | non-coding | upstream | 13455 | 86219358 ~ 86220198 (+) |
| G1500184 | NA | non-coding | upstream | 22749 | 86210413 ~ 86210904 (+) |
| G1500159 | NA | non-coding | upstream | 46875 | 86186385 ~ 86186778 (+) |
| G1500125 | NA | non-coding | upstream | 93309 | 86138688 ~ 86140344 (+) |
| G1500192 | NA | non-coding | downstream | 15018 | 86249126 ~ 86250123 (+) |
| G1500236 | NA | non-coding | downstream | 138944 | 86373052 ~ 86377080 (+) |
| G1500240 | NA | non-coding | downstream | 149689 | 86383797 ~ 86384244 (+) |
| G1500249 | NA | non-coding | downstream | 183096 | 86417204 ~ 86417458 (+) |
| G1500253 | NA | non-coding | downstream | 186955 | 86421063 ~ 86421263 (+) |
| G1499923 | LOC106566127 | other | upstream | 521794 | 85625443 ~ 85711859 (+) |
| G1499374 | NA | other | upstream | 940532 | 85291785 ~ 85293121 (+) |
| LOC110494772 | LOC105007909 | other | upstream | 945537 | 85269122 ~ 85288116 (+) |
| G1499347 | NA | other | upstream | 1017580 | 85214793 ~ 85216073 (+) |
| G1499159 | NA | other | upstream | 1422468 | 84810531 ~ 84811185 (+) |
| G1500198 | NA | other | downstream | 33220 | 86267328 ~ 86268175 (+) |
| G1500239 | NA | other | downstream | 148190 | 86382298 ~ 86383545 (+) |
| G1500170 | LOC106566147 | other | downstream | 286722 | 86520830 ~ 86527030 (+) |
| G1501148 | NA | other | downstream | 934431 | 87168539 ~ 87169007 (+) |
| LOC110494789 | bloc1s1 | other | downstream | 1190402 | 87415720 ~ 87486890 (+) |
