G1500192


Basic Information

Item Value
gene id G1500192
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 86249126 ~ 86250123 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1715178
GTTTAATCATGTTGTTTATTCAGATGATATCTCAACAACAGTCAGGTACAGTACAGTCCATCGTAGGCAATGAAAAACAACACAGTAGATTTAAAAGTAGTGTGTGGTATTTTAGTCTCAGCCACAATAATAATAAGTTACAAGCAACTGAGCATGAAACATTTAAGGTACACAGGCATATTTACAAGCATCCCTCCGGGACTTCAggccccccccaacacacactgctACATGTCCATACATCGTCTTTCTGGTTGACGACGCGTCCCGATTCTTCACCcttctcccaaagtgtgcactagCACACTTCCCGAAAAGGGTGGATAAATCAGCATTGGTTGTTTGTTTTTGTGCAGTAATGTTGTAGACAACATGGCTATTCCACTTCTTGAGCCCTCAAAATTGGGACATTCAATGAAATGACTTAGCGGAATGTTGTAGCACAGAACTACAACTAGTGTGGATGAAGAGGTTGAAAGGATCTGGATAAATATTTTTCATTGCGAAAAAGCCAGCGAGCTTTGAagggataatatatatatatatatgtgggtGTAATGCATTGCATTTGATACTAAATTAAAGACTTCAAATGGAGAGATGTggaaaaggagaaaaataaatcaaGAAAATTTGGTGGCCATTTGAGCTTTTTTTTGTCcggttttttctttttttatactTTCAAATCAAAACATTCCACTTTGCAGGAAAAAAAAGAAGGCTGACGTggaagagatacagagagagataagatCCTCCACTCCCTCAATTTGCCCAACTGTCCTGacagacgtttttttttttttttaataaagaaaCCAGATTTATTTGTTGAGAGTCTTCATTCTCTGGTCCAGAGCTGCAAAGTTCTCCTCTACAGACAAGAGATTCTCCTTCATGGTTGT

Function

NR:

description
dynactin subunit 2 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1715178 True 908 lncRNA 0.38 2 86249126 86250123

Neighbor

gene id symbol gene type direction distance location
mars1 mars coding upstream 10772 86183733 ~ 86238354 (+)
LOC118936559 LOC106566131 coding upstream 143189 86102351 ~ 86105937 (+)
LOC110494777 LOC106566131 coding upstream 146815 86092647 ~ 86102311 (+)
LOC110493285 LOC106566129 coding upstream 239685 85849052 ~ 86009441 (+)
LOC110493284 LOC106566126 coding upstream 427388 85730542 ~ 85824609 (+)
LOC118940507 kif5a coding downstream 26267 86276390 ~ 86452362 (+)
soat2 LOC106566146 coding downstream 217003 86467126 ~ 86511354 (+)
tarbp2 tarbp2 coding downstream 406555 86656678 ~ 86673359 (+)
sp1 sp1 coding downstream 449415 86699538 ~ 86711214 (+)
LOC110494798 amhr2 coding downstream 464978 86715101 ~ 86734187 (+)
G1500187 NA non-coding upstream 15018 86233653 ~ 86234108 (+)
G1500186 NA non-coding upstream 25311 86222168 ~ 86223815 (+)
G1500185 NA non-coding upstream 28928 86219358 ~ 86220198 (+)
G1500184 NA non-coding upstream 38222 86210413 ~ 86210904 (+)
G1500159 NA non-coding upstream 62348 86186385 ~ 86186778 (+)
G1500236 NA non-coding downstream 122929 86373052 ~ 86377080 (+)
G1500240 NA non-coding downstream 133674 86383797 ~ 86384244 (+)
G1500249 NA non-coding downstream 167081 86417204 ~ 86417458 (+)
G1500253 NA non-coding downstream 170940 86421063 ~ 86421263 (+)
G1500254 NA non-coding downstream 174843 86424966 ~ 86425257 (+)
G1499923 LOC106566127 other upstream 537267 85625443 ~ 85711859 (+)
G1499374 NA other upstream 956005 85291785 ~ 85293121 (+)
LOC110494772 LOC105007909 other upstream 961010 85269122 ~ 85288116 (+)
G1499347 NA other upstream 1033053 85214793 ~ 85216073 (+)
G1499159 NA other upstream 1437941 84810531 ~ 84811185 (+)
G1500198 NA other downstream 17205 86267328 ~ 86268175 (+)
G1500239 NA other downstream 132175 86382298 ~ 86383545 (+)
G1500170 LOC106566147 other downstream 270707 86520830 ~ 86527030 (+)
G1501148 NA other downstream 918416 87168539 ~ 87169007 (+)
LOC110494789 bloc1s1 other downstream 1174387 87415720 ~ 87486890 (+)

Expression


Co-expression Network