G1500765


Basic Information

Item Value
gene id G1500765
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 86252495 ~ 86253248 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1715896
tctactgcctctgatctggcagactcactaaacagagaacatccctggtccctactgcctctgatctggcagactcactaaacagagaacatccctggtccctactgcctctgatctggcagactcactaaacagagaacatccctggtccctactgcctctgatctggcagactcactaaacagagaacatccctggtcatctactgcctttcatctggcagactcactaaacagagaacatccctggtcatctactgcctctgatctggcagactcactaaacagagaacatccctggtccctactgcctctgatctggcagactcactaaacagagaacatccctggtccctactgcctctgatctggcagactcactaaacacaaatgcttcgtttgtaaatgacgTCTGAGTTTGCCCCTGGGCTACCTGTAAATAACATCTGACTAAAATGGTGCCTTTTGGTTTGCTtaacataaggaatttgaaatgatttatacatttgacttatactgaacaaaaatagaaactcaacatgcaacaatttccttGATTTGACGGAGTTTACAGTTCAGTTCGTATGAGGAAATCGGTCAATGGAAATCCATTAAGCCCTAAATCCATATGGATTTCACAGGACTGAGAATACA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1715896 True 653 lncRNA 0.45 2 86252495 86253248

Neighbor

gene id symbol gene type direction distance location
LOC110494779 ddit3 coding downstream 9504 86236554 ~ 86242991 (-)
LOC110493286 LOC106566136 coding downstream 68890 86118575 ~ 86183605 (-)
LOC110494776 LOC106566127 coding downstream 539365 85710201 ~ 85713130 (-)
LOC110494775 LOC106566119 coding downstream 827101 85344521 ~ 85425394 (-)
LOC118940505 NA coding downstream 925783 85325153 ~ 85326712 (-)
igsf8 igsf8 coding upstream 287551 86540799 ~ 86555989 (-)
sp7 sp7 coding upstream 352692 86605940 ~ 86610581 (-)
tespa1 LOC106566176 coding upstream 420204 86673452 ~ 86697487 (-)
LOC110495202 LOC106566175 coding upstream 458205 86711453 ~ 86714926 (-)
LOC110494797 LOC106596199 coding upstream 487300 86740548 ~ 86774465 (-)
G1500748 NA non-coding downstream 60098 86190858 ~ 86192397 (-)
G1500728 NA non-coding downstream 92618 86158498 ~ 86159877 (-)
G1500717 NA non-coding downstream 115268 86135194 ~ 86137227 (-)
G1500710 NA non-coding downstream 140737 86110908 ~ 86111758 (-)
G1500702 LOC106566131 non-coding downstream 146025 86105132 ~ 86106470 (-)
G1500771 NA non-coding upstream 20304 86273552 ~ 86274126 (-)
G1500774 NA non-coding upstream 27212 86280460 ~ 86281241 (-)
G1500775 NA non-coding upstream 28641 86281889 ~ 86282188 (-)
G1500814 NA non-coding upstream 155979 86409227 ~ 86409700 (-)
G1500815 NA non-coding upstream 162889 86416137 ~ 86416473 (-)
G1499684 NA other downstream 964378 85251788 ~ 85288117 (-)
G1499671 NA other downstream 1029376 85221125 ~ 85223119 (-)
G1498522 NA other downstream 2195103 84051010 ~ 84057392 (-)
G1498442 NA other downstream 2269601 83982341 ~ 83982894 (-)
G1500834 LOC106566150 other upstream 196431 86449679 ~ 86450734 (-)
LOC110493290 map3k12 other upstream 544817 86798065 ~ 86880836 (-)
G1501650 LOC106566166 other upstream 880810 87134058 ~ 87166800 (-)
G1501745 NA other upstream 1141532 87394780 ~ 87395835 (-)
dnsl3 dnsl3 other upstream 1909030 88162116 ~ 88175346 (-)

Expression


Co-expression Network