Gene
RNA
| Item | Value |
|---|---|
| gene id | G1500236 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 86373052 ~ 86377080 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1715228 | True | 257 | lncRNA | 0.41 | 2 | 86373052 | 86377080 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mars1 | mars | coding | upstream | 134698 | 86183733 ~ 86238354 (+) |
| LOC118936559 | LOC106566131 | coding | upstream | 267115 | 86102351 ~ 86105937 (+) |
| LOC110494777 | LOC106566131 | coding | upstream | 270741 | 86092647 ~ 86102311 (+) |
| LOC110493285 | LOC106566129 | coding | upstream | 363611 | 85849052 ~ 86009441 (+) |
| LOC118940162 | NA | coding | upstream | 622295 | 85750013 ~ 85750757 (+) |
| soat2 | LOC106566146 | coding | downstream | 90046 | 86467126 ~ 86511354 (+) |
| tarbp2 | tarbp2 | coding | downstream | 279598 | 86656678 ~ 86673359 (+) |
| sp1 | sp1 | coding | downstream | 322458 | 86699538 ~ 86711214 (+) |
| LOC110494798 | amhr2 | coding | downstream | 338021 | 86715101 ~ 86734187 (+) |
| prr13 | NA | coding | downstream | 401964 | 86779044 ~ 86781359 (+) |
| G1500192 | NA | non-coding | upstream | 122929 | 86249126 ~ 86250123 (+) |
| G1500187 | NA | non-coding | upstream | 138944 | 86233653 ~ 86234108 (+) |
| G1500186 | NA | non-coding | upstream | 149237 | 86222168 ~ 86223815 (+) |
| G1500185 | NA | non-coding | upstream | 152854 | 86219358 ~ 86220198 (+) |
| G1500184 | NA | non-coding | upstream | 162148 | 86210413 ~ 86210904 (+) |
| G1500240 | NA | non-coding | downstream | 6717 | 86383797 ~ 86384244 (+) |
| G1500249 | NA | non-coding | downstream | 40124 | 86417204 ~ 86417458 (+) |
| G1500253 | NA | non-coding | downstream | 43983 | 86421063 ~ 86421263 (+) |
| G1500254 | NA | non-coding | downstream | 47886 | 86424966 ~ 86425257 (+) |
| G1500258 | NA | non-coding | downstream | 55409 | 86432489 ~ 86432732 (+) |
| G1500198 | NA | other | upstream | 104877 | 86267328 ~ 86268175 (+) |
| G1499923 | LOC106566127 | other | upstream | 661193 | 85625443 ~ 85711859 (+) |
| G1499374 | NA | other | upstream | 1079931 | 85291785 ~ 85293121 (+) |
| LOC110494772 | LOC105007909 | other | upstream | 1084936 | 85269122 ~ 85288116 (+) |
| G1499347 | NA | other | upstream | 1156979 | 85214793 ~ 85216073 (+) |
| G1500239 | NA | other | downstream | 5218 | 86382298 ~ 86383545 (+) |
| G1500170 | LOC106566147 | other | downstream | 143750 | 86520830 ~ 86527030 (+) |
| G1501148 | NA | other | downstream | 791459 | 87168539 ~ 87169007 (+) |
| LOC110494789 | bloc1s1 | other | downstream | 1047430 | 87415720 ~ 87486890 (+) |
| LOC110494816 | LOC106566192 | other | downstream | 1712577 | 88089634 ~ 88143474 (+) |
