Gene
RNA
| Item | Value |
|---|---|
| gene id | G1500818 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 86421343 ~ 86421546 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1715951 | True | 204 | lncRNA | 0.33 | 1 | 86421343 | 86421546 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| dctn2 | LOC106566142 | coding | downstream | 145284 | 86249232 ~ 86276059 (-) |
| LOC110494779 | ddit3 | coding | downstream | 178352 | 86236554 ~ 86242991 (-) |
| LOC110493286 | LOC106566136 | coding | downstream | 237738 | 86118575 ~ 86183605 (-) |
| LOC110494776 | LOC106566127 | coding | downstream | 708213 | 85710201 ~ 85713130 (-) |
| LOC110494775 | LOC106566119 | coding | downstream | 995949 | 85344521 ~ 85425394 (-) |
| igsf8 | igsf8 | coding | upstream | 119253 | 86540799 ~ 86555989 (-) |
| sp7 | sp7 | coding | upstream | 184394 | 86605940 ~ 86610581 (-) |
| tespa1 | LOC106566176 | coding | upstream | 251906 | 86673452 ~ 86697487 (-) |
| LOC110495202 | LOC106566175 | coding | upstream | 289907 | 86711453 ~ 86714926 (-) |
| LOC110494797 | LOC106596199 | coding | upstream | 319002 | 86740548 ~ 86774465 (-) |
| G1500815 | NA | non-coding | downstream | 4870 | 86416137 ~ 86416473 (-) |
| G1500814 | NA | non-coding | downstream | 11643 | 86409227 ~ 86409700 (-) |
| G1500775 | NA | non-coding | downstream | 139155 | 86281889 ~ 86282188 (-) |
| G1500774 | NA | non-coding | downstream | 140102 | 86280460 ~ 86281241 (-) |
| G1500771 | NA | non-coding | downstream | 147217 | 86273552 ~ 86274126 (-) |
| G1500819 | LOC102795712 | non-coding | upstream | 492 | 86422038 ~ 86422425 (-) |
| G1500821 | NA | non-coding | upstream | 5912 | 86427458 ~ 86427726 (-) |
| G1500822 | NA | non-coding | upstream | 6289 | 86427835 ~ 86428065 (-) |
| G1500823 | NA | non-coding | upstream | 6842 | 86428388 ~ 86428608 (-) |
| G1500824 | NA | non-coding | upstream | 7350 | 86428896 ~ 86429722 (-) |
| G1499684 | NA | other | downstream | 1133226 | 85251788 ~ 85288117 (-) |
| G1499671 | NA | other | downstream | 1198224 | 85221125 ~ 85223119 (-) |
| G1498522 | NA | other | downstream | 2363951 | 84051010 ~ 84057392 (-) |
| G1498442 | NA | other | downstream | 2438449 | 83982341 ~ 83982894 (-) |
| G1500834 | LOC106566150 | other | upstream | 28133 | 86449679 ~ 86450734 (-) |
| LOC110493290 | map3k12 | other | upstream | 376519 | 86798065 ~ 86880836 (-) |
| G1501650 | LOC106566166 | other | upstream | 712512 | 87134058 ~ 87166800 (-) |
| G1501745 | NA | other | upstream | 973234 | 87394780 ~ 87395835 (-) |
| dnsl3 | dnsl3 | other | upstream | 1740732 | 88162116 ~ 88175346 (-) |
