G1500819 (LOC102795712)


Basic Information

Item Value
gene id G1500819
gene name LOC102795712
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 86422038 ~ 86422425 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1715952
GTACAATTGGTAATCATATTGGGTCACCTGTGAGATGAGTAGTTGGCAAGAGGACAGCTCTCTTCCAGTCTCCTCCATCTTCCTATGAAACTCCATCTGAAGGTTCTCTAGCTGACGACAGCGTTTCACCATGGACTTGACCTCTGACTTGATTTTACTGATGTAGAGACGAGCTACTGTAAACTCCTCCTCGATCGCCCCCGTTATCTCCATCGgctaggaggggaggagagggaaagctTACAATTTTCATTGATTCAATATGTTCCAGTATGTTTGCATTGGCAATCATATATGGCTACACTCTCCATGCCAATAATGACCTTTTGaatttgagagacagagagtggggacagagaaaagaaagagaaagacagctggagagaac

Function

NR:

description
PREDICTED: kinesin heavy chain, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1715952 True 388 lncRNA 0.45 1 86422038 86422425

Neighbor

gene id symbol gene type direction distance location
dctn2 LOC106566142 coding downstream 145979 86249232 ~ 86276059 (-)
LOC110494779 ddit3 coding downstream 179047 86236554 ~ 86242991 (-)
LOC110493286 LOC106566136 coding downstream 238433 86118575 ~ 86183605 (-)
LOC110494776 LOC106566127 coding downstream 708908 85710201 ~ 85713130 (-)
LOC110494775 LOC106566119 coding downstream 996644 85344521 ~ 85425394 (-)
igsf8 igsf8 coding upstream 118374 86540799 ~ 86555989 (-)
sp7 sp7 coding upstream 183515 86605940 ~ 86610581 (-)
tespa1 LOC106566176 coding upstream 251027 86673452 ~ 86697487 (-)
LOC110495202 LOC106566175 coding upstream 289028 86711453 ~ 86714926 (-)
LOC110494797 LOC106596199 coding upstream 318123 86740548 ~ 86774465 (-)
G1500818 NA non-coding downstream 492 86421343 ~ 86421546 (-)
G1500815 NA non-coding downstream 5565 86416137 ~ 86416473 (-)
G1500814 NA non-coding downstream 12338 86409227 ~ 86409700 (-)
G1500775 NA non-coding downstream 139850 86281889 ~ 86282188 (-)
G1500774 NA non-coding downstream 140797 86280460 ~ 86281241 (-)
G1500821 NA non-coding upstream 5033 86427458 ~ 86427726 (-)
G1500822 NA non-coding upstream 5410 86427835 ~ 86428065 (-)
G1500823 NA non-coding upstream 5963 86428388 ~ 86428608 (-)
G1500824 NA non-coding upstream 6471 86428896 ~ 86429722 (-)
G1500829 NA non-coding upstream 13200 86435625 ~ 86437461 (-)
G1499684 NA other downstream 1133921 85251788 ~ 85288117 (-)
G1499671 NA other downstream 1198919 85221125 ~ 85223119 (-)
G1498522 NA other downstream 2364646 84051010 ~ 84057392 (-)
G1498442 NA other downstream 2439144 83982341 ~ 83982894 (-)
G1500834 LOC106566150 other upstream 27254 86449679 ~ 86450734 (-)
LOC110493290 map3k12 other upstream 375640 86798065 ~ 86880836 (-)
G1501650 LOC106566166 other upstream 711633 87134058 ~ 87166800 (-)
G1501745 NA other upstream 972355 87394780 ~ 87395835 (-)
dnsl3 dnsl3 other upstream 1739853 88162116 ~ 88175346 (-)

Expression


Co-expression Network