G1500254


Basic Information

Item Value
gene id G1500254
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 86424966 ~ 86425257 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1715247
ccaaactaccaggtgtgaaacagggaagggactcagggggtatgctaatttggtatagagcagacctaactcactccattaaattaatcaaaacaggaacattctacatttggctagaaattcaaaaggaaatgatcctaacagagaaaaatgtcctcctgtgtgctacctatatccccccactagaatccccatattttaatgaagacagcttctccatcctggagggggaaatcaatcatttccaggcccagggacatgtactagtctgtggcgacctaaatgccagaac

Function

NR:

description
PREDICTED: RNA-directed DNA polymerase from mobile element jockey-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1715247 True 292 lncRNA 0.43 1 86424966 86425257

Neighbor

gene id symbol gene type direction distance location
mars1 mars coding upstream 186612 86183733 ~ 86238354 (+)
LOC118936559 LOC106566131 coding upstream 319029 86102351 ~ 86105937 (+)
LOC110494777 LOC106566131 coding upstream 322655 86092647 ~ 86102311 (+)
LOC110493285 LOC106566129 coding upstream 415525 85849052 ~ 86009441 (+)
LOC118940162 NA coding upstream 674209 85750013 ~ 85750757 (+)
soat2 LOC106566146 coding downstream 41869 86467126 ~ 86511354 (+)
tarbp2 tarbp2 coding downstream 231421 86656678 ~ 86673359 (+)
sp1 sp1 coding downstream 274281 86699538 ~ 86711214 (+)
LOC110494798 amhr2 coding downstream 289844 86715101 ~ 86734187 (+)
prr13 NA coding downstream 353787 86779044 ~ 86781359 (+)
G1500253 NA non-coding upstream 3703 86421063 ~ 86421263 (+)
G1500249 NA non-coding upstream 7508 86417204 ~ 86417458 (+)
G1500240 NA non-coding upstream 40722 86383797 ~ 86384244 (+)
G1500236 NA non-coding upstream 47886 86373052 ~ 86377080 (+)
G1500192 NA non-coding upstream 174843 86249126 ~ 86250123 (+)
G1500258 NA non-coding downstream 7232 86432489 ~ 86432732 (+)
G1500259 NA non-coding downstream 8446 86433703 ~ 86434075 (+)
G1500176 NA non-coding downstream 27843 86453100 ~ 86456213 (+)
G1500172 NA non-coding downstream 33120 86458377 ~ 86459865 (+)
G1500168 NA non-coding downstream 34897 86460154 ~ 86464207 (+)
G1500239 NA other upstream 41421 86382298 ~ 86383545 (+)
G1500198 NA other upstream 156791 86267328 ~ 86268175 (+)
G1499923 LOC106566127 other upstream 713107 85625443 ~ 85711859 (+)
G1499374 NA other upstream 1131845 85291785 ~ 85293121 (+)
LOC110494772 LOC105007909 other upstream 1136850 85269122 ~ 85288116 (+)
G1500170 LOC106566147 other downstream 95573 86520830 ~ 86527030 (+)
G1501148 NA other downstream 743282 87168539 ~ 87169007 (+)
LOC110494789 bloc1s1 other downstream 999253 87415720 ~ 87486890 (+)
LOC110494816 LOC106566192 other downstream 1664400 88089634 ~ 88143474 (+)
G1502352 NA other downstream 2344613 88769870 ~ 88800640 (+)

Expression


Co-expression Network