Gene
RNA
| Item | Value |
|---|---|
| gene id | G1500830 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 86442547 ~ 86445367 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1715965 | True | 315 | lncRNA | 0.36 | 2 | 86442547 | 86445367 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| dctn2 | LOC106566142 | coding | downstream | 166488 | 86249232 ~ 86276059 (-) |
| LOC110494779 | ddit3 | coding | downstream | 199556 | 86236554 ~ 86242991 (-) |
| LOC110493286 | LOC106566136 | coding | downstream | 258942 | 86118575 ~ 86183605 (-) |
| LOC110494776 | LOC106566127 | coding | downstream | 729417 | 85710201 ~ 85713130 (-) |
| LOC110494775 | LOC106566119 | coding | downstream | 1017153 | 85344521 ~ 85425394 (-) |
| igsf8 | igsf8 | coding | upstream | 95432 | 86540799 ~ 86555989 (-) |
| sp7 | sp7 | coding | upstream | 160573 | 86605940 ~ 86610581 (-) |
| tespa1 | LOC106566176 | coding | upstream | 228085 | 86673452 ~ 86697487 (-) |
| LOC110495202 | LOC106566175 | coding | upstream | 266086 | 86711453 ~ 86714926 (-) |
| LOC110494797 | LOC106596199 | coding | upstream | 295181 | 86740548 ~ 86774465 (-) |
| G1500829 | NA | non-coding | downstream | 5086 | 86435625 ~ 86437461 (-) |
| G1500824 | NA | non-coding | downstream | 12825 | 86428896 ~ 86429722 (-) |
| G1500823 | NA | non-coding | downstream | 13939 | 86428388 ~ 86428608 (-) |
| G1500822 | NA | non-coding | downstream | 14482 | 86427835 ~ 86428065 (-) |
| G1500821 | NA | non-coding | downstream | 14821 | 86427458 ~ 86427726 (-) |
| G1500832 | NA | non-coding | upstream | 466 | 86445833 ~ 86446211 (-) |
| G1500833 | LOC106566150 | non-coding | upstream | 3874 | 86449241 ~ 86449485 (-) |
| G1500835 | NA | non-coding | upstream | 5719 | 86451086 ~ 86451624 (-) |
| G1500861 | NA | non-coding | upstream | 59467 | 86504834 ~ 86509078 (-) |
| G1500840 | NA | non-coding | upstream | 90867 | 86536234 ~ 86537116 (-) |
| G1499684 | NA | other | downstream | 1154430 | 85251788 ~ 85288117 (-) |
| G1499671 | NA | other | downstream | 1219428 | 85221125 ~ 85223119 (-) |
| G1498522 | NA | other | downstream | 2385155 | 84051010 ~ 84057392 (-) |
| G1498442 | NA | other | downstream | 2459653 | 83982341 ~ 83982894 (-) |
| G1500834 | LOC106566150 | other | upstream | 4312 | 86449679 ~ 86450734 (-) |
| LOC110493290 | map3k12 | other | upstream | 352698 | 86798065 ~ 86880836 (-) |
| G1501650 | LOC106566166 | other | upstream | 688691 | 87134058 ~ 87166800 (-) |
| G1501745 | NA | other | upstream | 949413 | 87394780 ~ 87395835 (-) |
| dnsl3 | dnsl3 | other | upstream | 1716911 | 88162116 ~ 88175346 (-) |
