Gene
RNA
| Item | Value |
|---|---|
| gene id | G1500270 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 86509615 ~ 86510645 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1715263 | True | 953 | lncRNA | 0.42 | 2 | 86509615 | 86510645 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118940507 | kif5a | coding | upstream | 57253 | 86276390 ~ 86452362 (+) |
| mars1 | mars | coding | upstream | 271261 | 86183733 ~ 86238354 (+) |
| LOC118936559 | LOC106566131 | coding | upstream | 403678 | 86102351 ~ 86105937 (+) |
| LOC110494777 | LOC106566131 | coding | upstream | 407304 | 86092647 ~ 86102311 (+) |
| LOC110493285 | LOC106566129 | coding | upstream | 500174 | 85849052 ~ 86009441 (+) |
| tarbp2 | tarbp2 | coding | downstream | 146033 | 86656678 ~ 86673359 (+) |
| sp1 | sp1 | coding | downstream | 188893 | 86699538 ~ 86711214 (+) |
| LOC110494798 | amhr2 | coding | downstream | 204456 | 86715101 ~ 86734187 (+) |
| prr13 | NA | coding | downstream | 268399 | 86779044 ~ 86781359 (+) |
| LOC110494796 | LOC106582661 | coding | downstream | 270926 | 86781571 ~ 86797881 (+) |
| G1500267 | NA | non-coding | upstream | 42677 | 86466601 ~ 86466938 (+) |
| G1500167 | NA | non-coding | upstream | 43678 | 86464403 ~ 86465937 (+) |
| G1500168 | NA | non-coding | upstream | 45408 | 86460154 ~ 86464207 (+) |
| G1500172 | NA | non-coding | upstream | 49750 | 86458377 ~ 86459865 (+) |
| G1500176 | NA | non-coding | upstream | 53402 | 86453100 ~ 86456213 (+) |
| G1500171 | LOC106566147 | non-coding | downstream | 4121 | 86514766 ~ 86519779 (+) |
| G1500169 | NA | non-coding | downstream | 20621 | 86531266 ~ 86535084 (+) |
| G1500180 | NA | non-coding | downstream | 25073 | 86535718 ~ 86536031 (+) |
| G1500175 | NA | non-coding | downstream | 25940 | 86536585 ~ 86537127 (+) |
| G1500174 | NA | non-coding | downstream | 26898 | 86537543 ~ 86538185 (+) |
| G1500239 | NA | other | upstream | 126070 | 86382298 ~ 86383545 (+) |
| G1500198 | NA | other | upstream | 241440 | 86267328 ~ 86268175 (+) |
| G1499923 | LOC106566127 | other | upstream | 797756 | 85625443 ~ 85711859 (+) |
| G1499374 | NA | other | upstream | 1216494 | 85291785 ~ 85293121 (+) |
| LOC110494772 | LOC105007909 | other | upstream | 1221499 | 85269122 ~ 85288116 (+) |
| G1500170 | LOC106566147 | other | downstream | 10185 | 86520830 ~ 86527030 (+) |
| G1501148 | NA | other | downstream | 657894 | 87168539 ~ 87169007 (+) |
| LOC110494789 | bloc1s1 | other | downstream | 913865 | 87415720 ~ 87486890 (+) |
| LOC110494816 | LOC106566192 | other | downstream | 1579012 | 88089634 ~ 88143474 (+) |
| G1502352 | NA | other | downstream | 2259225 | 88769870 ~ 88800640 (+) |
