G1500284


Basic Information

Item Value
gene id G1500284
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 86569036 ~ 86569252 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1715279
actgactcaaatctctagccactttaatcatggaaaaatgtatgtaataaatgtatcactagccactttaaacaatgctacttaatataatgtttacataccctacattactcatctcatatgtatatactgtactctataccatctactgcatcttgcctatgccgttcggccatcactcatttatatatctttatgtacatattcgtattcaaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1715279 True 217 lncRNA 0.32 1 86569036 86569252

Neighbor

gene id symbol gene type direction distance location
soat2 LOC106566146 coding upstream 57682 86467126 ~ 86511354 (+)
LOC118940507 kif5a coding upstream 116674 86276390 ~ 86452362 (+)
mars1 mars coding upstream 330682 86183733 ~ 86238354 (+)
LOC118936559 LOC106566131 coding upstream 463099 86102351 ~ 86105937 (+)
LOC110494777 LOC106566131 coding upstream 466725 86092647 ~ 86102311 (+)
tarbp2 tarbp2 coding downstream 87426 86656678 ~ 86673359 (+)
sp1 sp1 coding downstream 130286 86699538 ~ 86711214 (+)
LOC110494798 amhr2 coding downstream 145849 86715101 ~ 86734187 (+)
prr13 NA coding downstream 209792 86779044 ~ 86781359 (+)
LOC110494796 LOC106582661 coding downstream 212319 86781571 ~ 86797881 (+)
G1500283 NA non-coding upstream 783 86567353 ~ 86568253 (+)
G1500272 NA non-coding upstream 28033 86539782 ~ 86541003 (+)
G1500174 NA non-coding upstream 30851 86537543 ~ 86538185 (+)
G1500175 NA non-coding upstream 31909 86536585 ~ 86537127 (+)
G1500180 NA non-coding upstream 33005 86535718 ~ 86536031 (+)
G1500287 NA non-coding downstream 11136 86580388 ~ 86580650 (+)
G1500337 NA non-coding downstream 90104 86659356 ~ 86660411 (+)
G1500346 NA non-coding downstream 119725 86688977 ~ 86689293 (+)
G1500349 NA non-coding downstream 138238 86707490 ~ 86708062 (+)
G1500355 NA non-coding downstream 150985 86720237 ~ 86720856 (+)
G1500170 LOC106566147 other upstream 42006 86520830 ~ 86527030 (+)
G1500239 NA other upstream 185491 86382298 ~ 86383545 (+)
G1500198 NA other upstream 300861 86267328 ~ 86268175 (+)
G1499923 LOC106566127 other upstream 857177 85625443 ~ 85711859 (+)
G1499374 NA other upstream 1275915 85291785 ~ 85293121 (+)
G1501148 NA other downstream 599287 87168539 ~ 87169007 (+)
LOC110494789 bloc1s1 other downstream 855258 87415720 ~ 87486890 (+)
LOC110494816 LOC106566192 other downstream 1520405 88089634 ~ 88143474 (+)
G1502352 NA other downstream 2200618 88769870 ~ 88800640 (+)
G1502370 NA other downstream 2237726 88806978 ~ 88808969 (+)

Expression


Co-expression Network