Gene
RNA
| Item | Value |
|---|---|
| gene id | G1500918 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 86675632 ~ 86676110 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1716066 | True | 346 | lncRNA | 0.44 | 2 | 86675632 | 86676110 |
86,673,200
86,673,600
86,674,000
86,674,400
86,674,800
86,675,200
86,675,600
86,675,600
86,676,000
86,676,400
86,676,800
86,677,200
86,677,600
86,678,000
NC_048581.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| sp7 | sp7 | coding | downstream | 65051 | 86605940 ~ 86610581 (-) |
| igsf8 | igsf8 | coding | downstream | 119643 | 86540799 ~ 86555989 (-) |
| dctn2 | LOC106566142 | coding | downstream | 399573 | 86249232 ~ 86276059 (-) |
| LOC110494779 | ddit3 | coding | downstream | 432641 | 86236554 ~ 86242991 (-) |
| LOC110493286 | LOC106566136 | coding | downstream | 492027 | 86118575 ~ 86183605 (-) |
| LOC110495202 | LOC106566175 | coding | upstream | 35343 | 86711453 ~ 86714926 (-) |
| LOC110494797 | LOC106596199 | coding | upstream | 64438 | 86740548 ~ 86774465 (-) |
| LOC110493290 | map3k12 | coding | upstream | 124843 | 86798065 ~ 86880836 (-) |
| col2a1b | LOC106566180 | coding | upstream | 274100 | 86950210 ~ 87034105 (-) |
| LOC110494790 | ppp1r1a | coding | upstream | 584383 | 87260493 ~ 87296463 (-) |
| G1500913 | NA | non-coding | downstream | 2279 | 86671547 ~ 86673353 (-) |
| G1500889 | NA | non-coding | downstream | 60276 | 86613680 ~ 86615356 (-) |
| G1500879 | NA | non-coding | downstream | 95952 | 86575582 ~ 86579680 (-) |
| G1500866 | NA | non-coding | downstream | 131645 | 86543287 ~ 86543987 (-) |
| G1500840 | NA | non-coding | downstream | 138516 | 86536234 ~ 86537116 (-) |
| G1500930 | NA | non-coding | upstream | 17766 | 86693876 ~ 86694307 (-) |
| G1500941 | NA | non-coding | upstream | 27279 | 86703389 ~ 86781368 (-) |
| G1500911 | sp1 | non-coding | upstream | 32585 | 86708695 ~ 86711199 (-) |
| G1500958 | NA | non-coding | upstream | 56560 | 86732670 ~ 86733096 (-) |
| G1500943 | NA | non-coding | upstream | 112418 | 86788528 ~ 86790791 (-) |
| G1500834 | LOC106566150 | other | downstream | 224898 | 86449679 ~ 86450734 (-) |
| G1499684 | NA | other | downstream | 1387515 | 85251788 ~ 85288117 (-) |
| G1499671 | NA | other | downstream | 1452513 | 85221125 ~ 85223119 (-) |
| G1498522 | NA | other | downstream | 2618240 | 84051010 ~ 84057392 (-) |
| G1501650 | LOC106566166 | other | upstream | 457948 | 87134058 ~ 87166800 (-) |
| G1501745 | NA | other | upstream | 718670 | 87394780 ~ 87395835 (-) |
| dnsl3 | dnsl3 | other | upstream | 1486168 | 88162116 ~ 88175346 (-) |
| G1502489 | NA | other | upstream | 1682042 | 88358152 ~ 88425505 (-) |
