Gene
RNA
| Item | Value |
|---|---|
| gene id | G1500349 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 86707490 ~ 86708062 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1715357 | True | 218 | lncRNA | 0.49 | 2 | 86707490 | 86708062 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tarbp2 | tarbp2 | coding | upstream | 34131 | 86656678 ~ 86673359 (+) |
| soat2 | LOC106566146 | coding | upstream | 196136 | 86467126 ~ 86511354 (+) |
| LOC118940507 | kif5a | coding | upstream | 255128 | 86276390 ~ 86452362 (+) |
| mars1 | mars | coding | upstream | 469136 | 86183733 ~ 86238354 (+) |
| LOC118936559 | LOC106566131 | coding | upstream | 601553 | 86102351 ~ 86105937 (+) |
| LOC110494798 | amhr2 | coding | downstream | 7039 | 86715101 ~ 86734187 (+) |
| prr13 | NA | coding | downstream | 70982 | 86779044 ~ 86781359 (+) |
| LOC110494796 | LOC106582661 | coding | downstream | 73509 | 86781571 ~ 86797881 (+) |
| myg1 | cssa12h12orf10 | coding | downstream | 175253 | 86883315 ~ 86909700 (+) |
| LOC110494793 | LOC106566167 | coding | downstream | 217333 | 86925395 ~ 86944826 (+) |
| G1500346 | NA | non-coding | upstream | 18197 | 86688977 ~ 86689293 (+) |
| G1500337 | NA | non-coding | upstream | 47079 | 86659356 ~ 86660411 (+) |
| G1500287 | NA | non-coding | upstream | 126840 | 86580388 ~ 86580650 (+) |
| G1500284 | NA | non-coding | upstream | 138238 | 86569036 ~ 86569252 (+) |
| G1500283 | NA | non-coding | upstream | 139237 | 86567353 ~ 86568253 (+) |
| G1500355 | NA | non-coding | downstream | 12175 | 86720237 ~ 86720856 (+) |
| G1500359 | NA | non-coding | downstream | 30100 | 86738162 ~ 86740217 (+) |
| G1500364 | NA | non-coding | downstream | 41073 | 86749135 ~ 86750243 (+) |
| G1500313 | NA | non-coding | downstream | 51109 | 86759171 ~ 86760479 (+) |
| G1500373 | NA | non-coding | downstream | 80285 | 86788347 ~ 86788807 (+) |
| G1500170 | LOC106566147 | other | upstream | 180460 | 86520830 ~ 86527030 (+) |
| G1500239 | NA | other | upstream | 323945 | 86382298 ~ 86383545 (+) |
| G1500198 | NA | other | upstream | 439315 | 86267328 ~ 86268175 (+) |
| G1499923 | LOC106566127 | other | upstream | 995631 | 85625443 ~ 85711859 (+) |
| G1499374 | NA | other | upstream | 1414369 | 85291785 ~ 85293121 (+) |
| G1501148 | NA | other | downstream | 460477 | 87168539 ~ 87169007 (+) |
| LOC110494789 | bloc1s1 | other | downstream | 716448 | 87415720 ~ 87486890 (+) |
| LOC110494816 | LOC106566192 | other | downstream | 1381595 | 88089634 ~ 88143474 (+) |
| G1502352 | NA | other | downstream | 2061808 | 88769870 ~ 88800640 (+) |
| G1502370 | NA | other | downstream | 2098916 | 88806978 ~ 88808969 (+) |
