G1500359


Basic Information

Item Value
gene id G1500359
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 86738162 ~ 86740217 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1715367
atgcatcTTCATTaactcaattatttatttattttacattgtttgcaaactgatatgtgacacgtattaatgccaaaataacatgcaaaacaggcaacaacaaccaaacgtttttatttttttaagctaAACAGGTGAATGACGGGTTGCCACTGCAAACAAATGAAagataacacaatgccacaaatgaaAACCGAGATGACTTCATTCAAAGATAAATAGGATAATTGAGCCTTGAAATCATATCGAGTTATATTTTTCCACTAGGCTACTTTACAGTCTGTCATTTTTGACACTCTGTTTCATGATGTGTGACAACATGTGCCCAATCTGTGATGTATTAGCTCTACTATTGGCTAAGCATAACGAGCACCTTCAATATTGTTGTATAATTGTAATGTTAAAGGTAAGATTttaatggagaaagctgatcctTGAGCAGCGCTGATTTTCTTTCGATCCTGTCAATATCTACAGACTAacgcagcctggtctcatagactagacgtaacacaggaaatgtaaaaaaaataattaaaaaaaaatgtttttcaaatttacaacatatcatacatttttacaattcgtaacatatcattcgttttacaaattcgtaacatgtttcacaaattcgtaacatatcatacttttTACACATTCCTAACATATCATACGATGGAAATCCACAAATTAGGACTAATATATACCATACAAAACATATCATTTTGGGCTCCCgaggcgcagcagtctaaggtactgcatctcagtgctagaggtgtcactacagaccctggtttgattctaggctgtatcacaacaggctgtgattgggagtcccatagggcccagcgtcgtccaggttagggtttggctggggtaggctatcattgtaagaatttgctcttaactgacttgcctagatcaATAAAGTGGAGTAAGTGGAGTGTATTGAATTGAtctacagaataatacgaaaagctctgagaccaggttgtctaACGATACACTTAGTGAAAGCTGGTAGCGTACGATCATCGTATTGCTTTAAATTAGGCTACATCGCAAGTGCGAAACGAGGCCCAGATAATTTACCAATACCCTGAAATTCCCTGGAGTGAGCAGAGGGTGGCGGTATACCCCTACACCCGTAAATTGGGTTTAGGGATAGGCATTCAAACGGACTAGGAACATAAGTGTATAGCAATTTACCGTAGAAACACACATGTTTTTTTCGAttagggcccggtttcccaaaaacATCTTAAGGCTAAATTCATCGTTAGAACGTTCGTAAAACCATCTTTACATTACCGAGCGTTTCCCAAAACCGTCTTTATTAACATTGCACTTGAAATTGCTCGtaatctaacgcctgcctcagaCAACTCGTAGAACAGCTAAAGTCATCGTTAGATCACCGTTTATAAAGATGATTATCCGTCTCTCTGTGACCACCAACAACTTCATAGTTGAATATAAATAACTTAAAAAGTTTGCAATGTTAAAAACAAGCGAAGCAAAATAACTGAATTATATAATAGCTAGATTATTAGGATATATATTAACATCACTTTCATCTATGTTCAATCGATAGACCTACCTAGTATTAAGCCATTAGACTCTGTCTGAGCTGTTTCAATATGATTAGGCCTATCTATTAGGTCCATAGGCTACTATTATCTAACCTAACCAATaatcttacatgctgaccagaccagacacgtcgcgtgcgcgagcgtcgcaaaataaatttagaaatccatgttattcaactATTGCaaccacactgctcgcgcgcgccaatGACGTCTGCGataccaagggctaaaatagaagtcattcctatttctgacgcagatcgcccggaaagtcctgcctctcccatctcctcattggtttatagaagcaggtaccctctgtgccatctcctcattggttatacccacgtgggtgattgaaagacgaactttGTTGCCGGTTGTTgtggtaatacaatgaaagtttagatgcgatcaccatataagttcaaag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1715367 True 2031 lncRNA 0.38 2 86738162 86740217

Neighbor

gene id symbol gene type direction distance location
LOC110494798 amhr2 coding upstream 3975 86715101 ~ 86734187 (+)
sp1 sp1 coding upstream 26948 86699538 ~ 86711214 (+)
tarbp2 tarbp2 coding upstream 64803 86656678 ~ 86673359 (+)
soat2 LOC106566146 coding upstream 226808 86467126 ~ 86511354 (+)
LOC118940507 kif5a coding upstream 285800 86276390 ~ 86452362 (+)
prr13 NA coding downstream 38827 86779044 ~ 86781359 (+)
LOC110494796 LOC106582661 coding downstream 41354 86781571 ~ 86797881 (+)
myg1 cssa12h12orf10 coding downstream 143098 86883315 ~ 86909700 (+)
LOC110494793 LOC106566167 coding downstream 185178 86925395 ~ 86944826 (+)
nckap1l LOC106566166 coding downstream 393879 87134096 ~ 87172285 (+)
G1500355 NA non-coding upstream 17306 86720237 ~ 86720856 (+)
G1500349 NA non-coding upstream 30100 86707490 ~ 86708062 (+)
G1500346 NA non-coding upstream 48869 86688977 ~ 86689293 (+)
G1500337 NA non-coding upstream 77751 86659356 ~ 86660411 (+)
G1500287 NA non-coding upstream 157512 86580388 ~ 86580650 (+)
G1500364 NA non-coding downstream 8918 86749135 ~ 86750243 (+)
G1500313 NA non-coding downstream 18954 86759171 ~ 86760479 (+)
G1500373 NA non-coding downstream 48130 86788347 ~ 86788807 (+)
G1500310 NA non-coding downstream 57999 86798216 ~ 86801184 (+)
G1500375 NA non-coding downstream 64910 86805127 ~ 86806197 (+)
G1500170 LOC106566147 other upstream 211132 86520830 ~ 86527030 (+)
G1500239 NA other upstream 354617 86382298 ~ 86383545 (+)
G1500198 NA other upstream 469987 86267328 ~ 86268175 (+)
G1499923 LOC106566127 other upstream 1026303 85625443 ~ 85711859 (+)
G1499374 NA other upstream 1445041 85291785 ~ 85293121 (+)
G1501148 NA other downstream 428322 87168539 ~ 87169007 (+)
LOC110494789 bloc1s1 other downstream 684293 87415720 ~ 87486890 (+)
LOC110494816 LOC106566192 other downstream 1349440 88089634 ~ 88143474 (+)
G1502352 NA other downstream 2029653 88769870 ~ 88800640 (+)
G1502370 NA other downstream 2066761 88806978 ~ 88808969 (+)

Expression


Co-expression Network