G1500313


Basic Information

Item Value
gene id G1500313
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 86759171 ~ 86760479 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1715317
TTGTAAAACTATGCTTTTATATCACGTTTCTTTACTGAGGTAATCGAGACCAATGTAAAACATCTCACTTTTAGTATAGCGGGCAGGTCTTGTTGATGACTCTGGGCAGACTGACCACTAGGAATCTCTGACTTTGGTGTGTTCTGTTGGTGTCTGTGGACAAAACACAAGATTATACACCTTACCCTACATACAGTAACTGGaagatacgcacacacacacacatgcacgcacgcactctctcacacacacacacacacacacgctacagtgtacaaaaacacatacatgtacacacacacacacaaactgtcatGGATGATCTACCTGTGTAATGCATTTCTCATACCTTTGTTTCGTAGAACCATCTCTCTTCCTGAAAAGCACTGGATGTCCCATAGATTggtcactcttcatggacacacagctAGTTACAGGTGAGACTGGTCTCTTCTGCTGGATTGGgcttcaacacaacagagacagaCATTCAGCCTCTAATCTGTTctgtgtaatgatgatgatgatgtcacaaACTGTAAAGGTTCAGACAGAACATACATGTATGCtattgtag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1715317 True 577 lncRNA 0.42 2 86759171 86760479

Neighbor

gene id symbol gene type direction distance location
LOC110494798 amhr2 coding upstream 24984 86715101 ~ 86734187 (+)
sp1 sp1 coding upstream 47957 86699538 ~ 86711214 (+)
tarbp2 tarbp2 coding upstream 85812 86656678 ~ 86673359 (+)
soat2 LOC106566146 coding upstream 247817 86467126 ~ 86511354 (+)
LOC118940507 kif5a coding upstream 306809 86276390 ~ 86452362 (+)
prr13 NA coding downstream 18565 86779044 ~ 86781359 (+)
LOC110494796 LOC106582661 coding downstream 21092 86781571 ~ 86797881 (+)
myg1 cssa12h12orf10 coding downstream 122836 86883315 ~ 86909700 (+)
LOC110494793 LOC106566167 coding downstream 164916 86925395 ~ 86944826 (+)
nckap1l LOC106566166 coding downstream 373617 87134096 ~ 87172285 (+)
G1500364 NA non-coding upstream 8928 86749135 ~ 86750243 (+)
G1500359 NA non-coding upstream 18954 86738162 ~ 86740217 (+)
G1500355 NA non-coding upstream 38315 86720237 ~ 86720856 (+)
G1500349 NA non-coding upstream 51109 86707490 ~ 86708062 (+)
G1500346 NA non-coding upstream 69878 86688977 ~ 86689293 (+)
G1500373 NA non-coding downstream 27868 86788347 ~ 86788807 (+)
G1500310 NA non-coding downstream 37737 86798216 ~ 86801184 (+)
G1500375 NA non-coding downstream 44648 86805127 ~ 86806197 (+)
G1500394 NA non-coding downstream 76596 86837075 ~ 86837563 (+)
G1500402 NA non-coding downstream 92129 86852608 ~ 86853070 (+)
G1500170 LOC106566147 other upstream 232141 86520830 ~ 86527030 (+)
G1500239 NA other upstream 375626 86382298 ~ 86383545 (+)
G1500198 NA other upstream 490996 86267328 ~ 86268175 (+)
G1499923 LOC106566127 other upstream 1047312 85625443 ~ 85711859 (+)
G1499374 NA other upstream 1466050 85291785 ~ 85293121 (+)
G1501148 NA other downstream 408060 87168539 ~ 87169007 (+)
LOC110494789 bloc1s1 other downstream 664031 87415720 ~ 87486890 (+)
LOC110494816 LOC106566192 other downstream 1329178 88089634 ~ 88143474 (+)
G1502352 NA other downstream 2009391 88769870 ~ 88800640 (+)
G1502370 NA other downstream 2046499 88806978 ~ 88808969 (+)

Expression


Co-expression Network