Gene
RNA
| Item | Value |
|---|---|
| gene id | G1500998 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 86863239 ~ 86863579 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1716157 | True | 341 | lncRNA | 0.40 | 1 | 86863239 | 86863579 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494797 | LOC106596199 | coding | downstream | 88774 | 86740548 ~ 86774465 (-) |
| LOC110495202 | LOC106566175 | coding | downstream | 148313 | 86711453 ~ 86714926 (-) |
| tespa1 | LOC106566176 | coding | downstream | 165752 | 86673452 ~ 86697487 (-) |
| sp7 | sp7 | coding | downstream | 252658 | 86605940 ~ 86610581 (-) |
| igsf8 | igsf8 | coding | downstream | 307250 | 86540799 ~ 86555989 (-) |
| col2a1b | LOC106566180 | coding | upstream | 86631 | 86950210 ~ 87034105 (-) |
| LOC110494790 | ppp1r1a | coding | upstream | 396914 | 87260493 ~ 87296463 (-) |
| npffl | npff | coding | upstream | 445846 | 87309425 ~ 87319111 (-) |
| itga7 | LOC106566153 | coding | upstream | 468660 | 87330714 ~ 87413554 (-) |
| LOC110495200 | LOC106566159 | coding | upstream | 630525 | 87494104 ~ 87507588 (-) |
| G1500997 | NA | non-coding | downstream | 1260 | 86861708 ~ 86861979 (-) |
| G1500995 | NA | non-coding | downstream | 4904 | 86858093 ~ 86858335 (-) |
| G1500991 | NA | non-coding | downstream | 6040 | 86856941 ~ 86857199 (-) |
| G1500986 | NA | non-coding | downstream | 16313 | 86846437 ~ 86846926 (-) |
| G1500984 | NA | non-coding | downstream | 25668 | 86836907 ~ 86837571 (-) |
| G1501030 | NA | non-coding | upstream | 97286 | 86960865 ~ 86961581 (-) |
| G1500993 | NA | non-coding | upstream | 116932 | 86980511 ~ 86980909 (-) |
| G1501051 | NA | non-coding | upstream | 153914 | 87017493 ~ 87018949 (-) |
| G1501071 | yo84 | non-coding | upstream | 189182 | 87052761 ~ 87052981 (-) |
| G1501098 | NA | non-coding | upstream | 218667 | 87082246 ~ 87082853 (-) |
| LOC110493290 | map3k12 | other | downstream | 56708 | 86798065 ~ 86880836 (-) |
| G1500834 | LOC106566150 | other | downstream | 412505 | 86449679 ~ 86450734 (-) |
| LOC110494779 | ddit3 | other | downstream | 620311 | 86236554 ~ 86242991 (-) |
| G1499684 | NA | other | downstream | 1575122 | 85251788 ~ 85288117 (-) |
| G1499671 | NA | other | downstream | 1640120 | 85221125 ~ 85223119 (-) |
| G1501650 | LOC106566166 | other | upstream | 270479 | 87134058 ~ 87166800 (-) |
| G1501745 | NA | other | upstream | 531201 | 87394780 ~ 87395835 (-) |
| dnsl3 | dnsl3 | other | upstream | 1298699 | 88162116 ~ 88175346 (-) |
| G1502489 | NA | other | upstream | 1494573 | 88358152 ~ 88425505 (-) |
| G1502566 | NA | other | upstream | 1686787 | 88550366 ~ 88552831 (-) |
