G1501030


Basic Information

Item Value
gene id G1501030
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 86960865 ~ 86961581 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1716189
AAGCAATACAGGTCCTACAGGCTTTATTCAACCCAGCACCCTACTGAAGCAACACAGGTCCTACAGGCTTTATTCAACCCAGCACCCTACTGAAGCAACACAGGTCCTACAGGCTTTATTCAACCCAGCACCCTACTGAAGCAACACAGGTCCTACAGGCTTTATTCAACCCAGCACCCTACTGAAGCAACACAGGTCCTACAGGCTTTATTCAACCCAGCACCCTACTGAAGCAACACAGGTCCTACAGGCTTTATTCAACCCAGCACCCTACTGAAGCAACACAGGTCCTACAGGCTTTATTCAACCCAGCACCCTACTGAAGCAACACAGGTCCTACAGGCTTTATTCAATACAGGTCCTACAGGCTTTATTCAATACATGTCCTACAGGCTTTAATCAATACAGGTCCTACAGGCTTTAATCAATACAGGTCCTACAGGCTTCATTCAACATTGACAAGTTATTTAGGTCACAGTGTTTCTGAACTCGTGGTGTTCTTCAGATTGTGATGTCACTGACAACACACATCCCACCACTCAAGTTAACACGGAAATACATTCATTTTGGGGTTTTGCAGCTATAAAACAACACTGGCTTTATGTCTTAAAAGTCTCTCTTTTGGTTTGACTTCCAACCCAACCGGCATGAACATCAGTCCAGGGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1716189 True 667 lncRNA 0.45 2 86960865 86961581

Neighbor

gene id symbol gene type direction distance location
LOC110493290 map3k12 coding downstream 80029 86798065 ~ 86880836 (-)
LOC110494797 LOC106596199 coding downstream 186400 86740548 ~ 86774465 (-)
LOC110495202 LOC106566175 coding downstream 245939 86711453 ~ 86714926 (-)
tespa1 LOC106566176 coding downstream 263378 86673452 ~ 86697487 (-)
sp7 sp7 coding downstream 350284 86605940 ~ 86610581 (-)
LOC110494790 ppp1r1a coding upstream 298912 87260493 ~ 87296463 (-)
npffl npff coding upstream 347844 87309425 ~ 87319111 (-)
itga7 LOC106566153 coding upstream 370658 87330714 ~ 87413554 (-)
LOC110495200 LOC106566159 coding upstream 532523 87494104 ~ 87507588 (-)
LOC110493297 LOC106566189 coding upstream 1183035 88144616 ~ 88159004 (-)
G1500998 NA non-coding downstream 97286 86863239 ~ 86863579 (-)
G1500997 NA non-coding downstream 98886 86861708 ~ 86861979 (-)
G1500995 NA non-coding downstream 102530 86858093 ~ 86858335 (-)
G1500991 NA non-coding downstream 103666 86856941 ~ 86857199 (-)
G1500986 NA non-coding downstream 113939 86846437 ~ 86846926 (-)
G1500993 NA non-coding upstream 18930 86980511 ~ 86980909 (-)
G1501051 NA non-coding upstream 55912 87017493 ~ 87018949 (-)
G1501071 yo84 non-coding upstream 91180 87052761 ~ 87052981 (-)
G1501098 NA non-coding upstream 120665 87082246 ~ 87082853 (-)
G1501100 NA non-coding upstream 122295 87083876 ~ 87084087 (-)
G1500834 LOC106566150 other downstream 510131 86449679 ~ 86450734 (-)
LOC110494779 ddit3 other downstream 717937 86236554 ~ 86242991 (-)
G1499684 NA other downstream 1672748 85251788 ~ 85288117 (-)
G1499671 NA other downstream 1737746 85221125 ~ 85223119 (-)
G1501650 LOC106566166 other upstream 172477 87134058 ~ 87166800 (-)
G1501745 NA other upstream 433199 87394780 ~ 87395835 (-)
dnsl3 dnsl3 other upstream 1200697 88162116 ~ 88175346 (-)
G1502489 NA other upstream 1396571 88358152 ~ 88425505 (-)
G1502566 NA other upstream 1588785 88550366 ~ 88552831 (-)

Expression


Co-expression Network