G1501086


Basic Information

Item Value
gene id G1501086
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 87066442 ~ 87069755 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1716251
acgaaggagagtcggaccaaaatgcagcgtgtggtttacgatccatgtttattaataatacgaaacacgaatctccaatacaatacaatacaatactacaaaacaaaacgtaacgaaaccctaacagcctatatagtgtgaacacagggacacataggacaggaacaatcacccacaaacacacagtgaaacccaggctacctaaatatggttcccaatcagagacaatgacgaacacctgcctctgactgagaaccatatcaggctgaacatagaaatagacaaacaagacatgaaacatagaatacccactcagatcac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1716251 True 321 lncRNA 0.41 2 87066442 87069755

Neighbor

gene id symbol gene type direction distance location
LOC110494793 LOC106566167 coding upstream 121616 86925395 ~ 86944826 (+)
myg1 cssa12h12orf10 coding upstream 156742 86883315 ~ 86909700 (+)
LOC110494796 LOC106582661 coding upstream 268561 86781571 ~ 86797881 (+)
prr13 NA coding upstream 285083 86779044 ~ 86781359 (+)
LOC110494798 amhr2 coding upstream 332255 86715101 ~ 86734187 (+)
nckap1l LOC106566166 coding downstream 64341 87134096 ~ 87172285 (+)
LOC110494792 LOC106566161 coding downstream 111696 87181451 ~ 87254075 (+)
LOC110494789 bloc1s1 coding downstream 345965 87415720 ~ 87486890 (+)
LOC110519410 LOC106566157 coding downstream 363956 87433711 ~ 87441188 (+)
LOC110494787 LOC106566158 coding downstream 372084 87441839 ~ 87480286 (+)
G1501084 NA non-coding upstream 1405 87064551 ~ 87065037 (+)
G1500411 NA non-coding upstream 108948 86871512 ~ 86957494 (+)
G1500405 NA non-coding upstream 114575 86926829 ~ 86951867 (+)
G1500434 NA non-coding upstream 131858 86932230 ~ 86934584 (+)
G1500423 NA non-coding upstream 170568 86894957 ~ 86895874 (+)
G1501091 NA non-coding downstream 2649 87072404 ~ 87072742 (+)
G1501092 NA non-coding downstream 3030 87072785 ~ 87074657 (+)
G1501093 NA non-coding downstream 3236 87072991 ~ 87077802 (+)
G1501094 NA non-coding downstream 5461 87075216 ~ 87077046 (+)
G1501142 NA non-coding downstream 87538 87157293 ~ 87157582 (+)
G1500170 LOC106566147 other upstream 539412 86520830 ~ 86527030 (+)
G1500239 NA other upstream 682897 86382298 ~ 86383545 (+)
G1500198 NA other upstream 798267 86267328 ~ 86268175 (+)
G1499923 LOC106566127 other upstream 1354583 85625443 ~ 85711859 (+)
G1499374 NA other upstream 1773321 85291785 ~ 85293121 (+)
G1501148 NA other downstream 98784 87168539 ~ 87169007 (+)
LOC110494816 LOC106566192 other downstream 1019902 88089634 ~ 88143474 (+)
G1502352 NA other downstream 1700115 88769870 ~ 88800640 (+)
G1502370 NA other downstream 1737223 88806978 ~ 88808969 (+)

Expression


Co-expression Network