G1501091


Basic Information

Item Value
gene id G1501091
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 87072404 ~ 87072742 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1716260
CCTCTAGCCGTCTGAGGCCTGCGTGTTAGATTAGGAGCACTGGTGAGAAAGAGCTGTTTAATGACGGACTGCTCCGCTCTGCTCTGCTAGAAAGTCAGCTAAATACACTGCGGCTACAGGAACTATTTCAATACTAtagatactagctgtagatactagctgtaggtactagctgtagatactagatGTAGATACTAGCTGTAGTTACTAGAAGTAagtactagctgtagatactagctgtaggtactagctgtagatactagctgtagatactagctacagaaactagctgtaggtactagctgtagatactagctgtaggtactagctgtagatact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1716260 True 339 lncRNA 0.43 1 87072404 87072742

Neighbor

gene id symbol gene type direction distance location
LOC110494793 LOC106566167 coding upstream 127578 86925395 ~ 86944826 (+)
myg1 cssa12h12orf10 coding upstream 162704 86883315 ~ 86909700 (+)
LOC110494796 LOC106582661 coding upstream 274523 86781571 ~ 86797881 (+)
prr13 NA coding upstream 291045 86779044 ~ 86781359 (+)
LOC110494798 amhr2 coding upstream 338217 86715101 ~ 86734187 (+)
nckap1l LOC106566166 coding downstream 61354 87134096 ~ 87172285 (+)
LOC110494792 LOC106566161 coding downstream 108709 87181451 ~ 87254075 (+)
LOC110494789 bloc1s1 coding downstream 342978 87415720 ~ 87486890 (+)
LOC110519410 LOC106566157 coding downstream 360969 87433711 ~ 87441188 (+)
LOC110494787 LOC106566158 coding downstream 369097 87441839 ~ 87480286 (+)
G1501086 NA non-coding upstream 2649 87066442 ~ 87069755 (+)
G1501084 NA non-coding upstream 7367 87064551 ~ 87065037 (+)
G1500405 NA non-coding upstream 120537 86926829 ~ 86951867 (+)
G1500434 NA non-coding upstream 137820 86932230 ~ 86934584 (+)
G1500423 NA non-coding upstream 176530 86894957 ~ 86895874 (+)
G1501092 NA non-coding downstream 43 87072785 ~ 87074657 (+)
G1501093 NA non-coding downstream 249 87072991 ~ 87077802 (+)
G1501094 NA non-coding downstream 2474 87075216 ~ 87077046 (+)
G1501142 NA non-coding downstream 84551 87157293 ~ 87157582 (+)
G1501143 NA non-coding downstream 85503 87158245 ~ 87158516 (+)
G1500170 LOC106566147 other upstream 545374 86520830 ~ 86527030 (+)
G1500239 NA other upstream 688859 86382298 ~ 86383545 (+)
G1500198 NA other upstream 804229 86267328 ~ 86268175 (+)
G1499923 LOC106566127 other upstream 1360545 85625443 ~ 85711859 (+)
G1499374 NA other upstream 1779283 85291785 ~ 85293121 (+)
G1501148 NA other downstream 95797 87168539 ~ 87169007 (+)
LOC110494816 LOC106566192 other downstream 1016915 88089634 ~ 88143474 (+)
G1502352 NA other downstream 1697128 88769870 ~ 88800640 (+)
G1502370 NA other downstream 1734236 88806978 ~ 88808969 (+)

Expression


Co-expression Network