Gene
RNA
| Item | Value |
|---|---|
| gene id | G1501094 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 87075216 ~ 87077046 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1716276 | True | 239 | lncRNA | 0.39 | 2 | 87075216 | 87077046 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494793 | LOC106566167 | coding | upstream | 130390 | 86925395 ~ 86944826 (+) |
| myg1 | cssa12h12orf10 | coding | upstream | 165516 | 86883315 ~ 86909700 (+) |
| LOC110494796 | LOC106582661 | coding | upstream | 277335 | 86781571 ~ 86797881 (+) |
| prr13 | NA | coding | upstream | 293857 | 86779044 ~ 86781359 (+) |
| LOC110494798 | amhr2 | coding | upstream | 341029 | 86715101 ~ 86734187 (+) |
| nckap1l | LOC106566166 | coding | downstream | 57050 | 87134096 ~ 87172285 (+) |
| LOC110494792 | LOC106566161 | coding | downstream | 104405 | 87181451 ~ 87254075 (+) |
| LOC110494789 | bloc1s1 | coding | downstream | 338674 | 87415720 ~ 87486890 (+) |
| LOC110519410 | LOC106566157 | coding | downstream | 356665 | 87433711 ~ 87441188 (+) |
| LOC110494787 | LOC106566158 | coding | downstream | 364793 | 87441839 ~ 87480286 (+) |
| G1501092 | NA | non-coding | upstream | 559 | 87072785 ~ 87074657 (+) |
| G1501091 | NA | non-coding | upstream | 2474 | 87072404 ~ 87072742 (+) |
| G1501086 | NA | non-coding | upstream | 5461 | 87066442 ~ 87069755 (+) |
| G1501084 | NA | non-coding | upstream | 10179 | 87064551 ~ 87065037 (+) |
| G1500405 | NA | non-coding | upstream | 123349 | 86926829 ~ 86951867 (+) |
| G1501142 | NA | non-coding | downstream | 80247 | 87157293 ~ 87157582 (+) |
| G1501143 | NA | non-coding | downstream | 81199 | 87158245 ~ 87158516 (+) |
| G1501149 | NA | non-coding | downstream | 95612 | 87172658 ~ 87172885 (+) |
| G1501151 | NA | non-coding | downstream | 101024 | 87178070 ~ 87178308 (+) |
| G1501156 | NA | non-coding | downstream | 105014 | 87182060 ~ 87190275 (+) |
| G1500170 | LOC106566147 | other | upstream | 548186 | 86520830 ~ 86527030 (+) |
| G1500239 | NA | other | upstream | 691671 | 86382298 ~ 86383545 (+) |
| G1500198 | NA | other | upstream | 807041 | 86267328 ~ 86268175 (+) |
| G1499923 | LOC106566127 | other | upstream | 1363357 | 85625443 ~ 85711859 (+) |
| G1499374 | NA | other | upstream | 1782095 | 85291785 ~ 85293121 (+) |
| G1501148 | NA | other | downstream | 91493 | 87168539 ~ 87169007 (+) |
| LOC110494816 | LOC106566192 | other | downstream | 1012611 | 88089634 ~ 88143474 (+) |
| G1502352 | NA | other | downstream | 1692824 | 88769870 ~ 88800640 (+) |
| G1502370 | NA | other | downstream | 1729932 | 88806978 ~ 88808969 (+) |
