Gene
RNA
| Item | Value |
|---|---|
| gene id | G1501143 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 87158245 ~ 87158516 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1716330 | True | 221 | lncRNA | 0.42 | 2 | 87158245 | 87158516 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494793 | LOC106566167 | coding | upstream | 213419 | 86925395 ~ 86944826 (+) |
| myg1 | cssa12h12orf10 | coding | upstream | 248545 | 86883315 ~ 86909700 (+) |
| LOC110494796 | LOC106582661 | coding | upstream | 360364 | 86781571 ~ 86797881 (+) |
| prr13 | NA | coding | upstream | 376886 | 86779044 ~ 86781359 (+) |
| LOC110494798 | amhr2 | coding | upstream | 424058 | 86715101 ~ 86734187 (+) |
| LOC110494792 | LOC106566161 | coding | downstream | 22935 | 87181451 ~ 87254075 (+) |
| LOC110494789 | bloc1s1 | coding | downstream | 257204 | 87415720 ~ 87486890 (+) |
| LOC110519410 | LOC106566157 | coding | downstream | 275195 | 87433711 ~ 87441188 (+) |
| LOC110494787 | LOC106566158 | coding | downstream | 283323 | 87441839 ~ 87480286 (+) |
| LOC110494786 | LOC106566159 | coding | downstream | 350393 | 87508909 ~ 87515178 (+) |
| G1501142 | NA | non-coding | upstream | 663 | 87157293 ~ 87157582 (+) |
| G1501093 | NA | non-coding | upstream | 80443 | 87072991 ~ 87077802 (+) |
| G1501094 | NA | non-coding | upstream | 81199 | 87075216 ~ 87077046 (+) |
| G1501092 | NA | non-coding | upstream | 83588 | 87072785 ~ 87074657 (+) |
| G1501091 | NA | non-coding | upstream | 85503 | 87072404 ~ 87072742 (+) |
| G1501149 | NA | non-coding | downstream | 14142 | 87172658 ~ 87172885 (+) |
| G1501151 | NA | non-coding | downstream | 19554 | 87178070 ~ 87178308 (+) |
| G1501156 | NA | non-coding | downstream | 23544 | 87182060 ~ 87190275 (+) |
| G1501165 | NA | non-coding | downstream | 72819 | 87231335 ~ 87231622 (+) |
| G1501169 | NA | non-coding | downstream | 77867 | 87236383 ~ 87236597 (+) |
| G1500170 | LOC106566147 | other | upstream | 631215 | 86520830 ~ 86527030 (+) |
| G1500239 | NA | other | upstream | 774700 | 86382298 ~ 86383545 (+) |
| G1500198 | NA | other | upstream | 890070 | 86267328 ~ 86268175 (+) |
| G1499923 | LOC106566127 | other | upstream | 1446386 | 85625443 ~ 85711859 (+) |
| G1499374 | NA | other | upstream | 1865124 | 85291785 ~ 85293121 (+) |
| G1501148 | NA | other | downstream | 10023 | 87168539 ~ 87169007 (+) |
| LOC110494816 | LOC106566192 | other | downstream | 931141 | 88089634 ~ 88143474 (+) |
| G1502352 | NA | other | downstream | 1611354 | 88769870 ~ 88800640 (+) |
| G1502370 | NA | other | downstream | 1648462 | 88806978 ~ 88808969 (+) |
