Gene
RNA
| Item | Value |
|---|---|
| gene id | G1501699 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 87278092 ~ 87278581 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1716979 | True | 467 | lncRNA | 0.41 | 2 | 87278092 | 87278581 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| col2a1b | LOC106566180 | coding | downstream | 243987 | 86950210 ~ 87034105 (-) |
| LOC110493290 | map3k12 | coding | downstream | 397256 | 86798065 ~ 86880836 (-) |
| LOC110494797 | LOC106596199 | coding | downstream | 503627 | 86740548 ~ 86774465 (-) |
| LOC110495202 | LOC106566175 | coding | downstream | 563166 | 86711453 ~ 86714926 (-) |
| tespa1 | LOC106566176 | coding | downstream | 580605 | 86673452 ~ 86697487 (-) |
| npffl | npff | coding | upstream | 30844 | 87309425 ~ 87319111 (-) |
| itga7 | LOC106566153 | coding | upstream | 53658 | 87330714 ~ 87413554 (-) |
| LOC110495200 | LOC106566159 | coding | upstream | 215523 | 87494104 ~ 87507588 (-) |
| LOC110493297 | LOC106566189 | coding | upstream | 866035 | 88144616 ~ 88159004 (-) |
| dnsl3 | dnsl3 | coding | upstream | 883535 | 88162116 ~ 88175346 (-) |
| G1501679 | NA | non-coding | downstream | 34500 | 87243355 ~ 87243592 (-) |
| G1501672 | NA | non-coding | downstream | 47262 | 87229227 ~ 87230830 (-) |
| G1501650 | LOC106566166 | non-coding | downstream | 111292 | 87134058 ~ 87166800 (-) |
| G1501128 | NA | non-coding | downstream | 147968 | 87124254 ~ 87130124 (-) |
| G1501117 | NA | non-coding | downstream | 168031 | 87109835 ~ 87110061 (-) |
| G1501690 | NA | non-coding | upstream | 14218 | 87292799 ~ 87318150 (-) |
| G1501721 | NA | non-coding | upstream | 61624 | 87340205 ~ 87340469 (-) |
| G1501768 | NA | non-coding | upstream | 151782 | 87430363 ~ 87486836 (-) |
| G1501774 | NA | non-coding | upstream | 162280 | 87440861 ~ 87442058 (-) |
| G1500834 | LOC106566150 | other | downstream | 827358 | 86449679 ~ 86450734 (-) |
| LOC110494779 | ddit3 | other | downstream | 1035164 | 86236554 ~ 86242991 (-) |
| G1499684 | NA | other | downstream | 1989975 | 85251788 ~ 85288117 (-) |
| G1501745 | NA | other | upstream | 116199 | 87394780 ~ 87395835 (-) |
| G1502489 | NA | other | upstream | 1079571 | 88358152 ~ 88425505 (-) |
| G1502566 | NA | other | upstream | 1271785 | 88550366 ~ 88552831 (-) |
| LOC110493292 | NA | other | upstream | 1594194 | 88872775 ~ 88877452 (-) |
