G1501218


Basic Information

Item Value
gene id G1501218
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 87340152 ~ 87340458 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1716416
gagaacatccctggtcatccctactgcctctgatctggcggactcactgaaccgagaacatccctggtcatccctactgcctctgatctggaggactcactaaacagagaacgtccctggtcatccctactgcctctgatctggaggactcactgaacagagaacatccctggtcctccctactgcctactgatctggcggactcactgaacagagaacatccctggtcctccctactgcctactgatctggcg
>TU1716417
gagaacatccctggtcatccctactgcctctgatctggcggactcactgaaccgagaacatccctggtcatccctactgcctctgatctggaggactcactaaacagagaacgtccctggtcatccctactgcctctgatctggaggactcactgaacagagaacatccctggtcctccctactgcctactgatctggaggactcactgaacagagaacatccctggtcctccctactgcctactgatctggcg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1716416 False 254 lncRNA 0.55 2 87340152 87340458
TU1716417 True 254 lncRNA 0.55 2 87340152 87340458

Neighbor

gene id symbol gene type direction distance location
LOC110494792 LOC106566161 coding upstream 86077 87181451 ~ 87254075 (+)
nckap1l LOC106566166 coding upstream 167867 87134096 ~ 87172285 (+)
LOC110494793 LOC106566167 coding upstream 395326 86925395 ~ 86944826 (+)
myg1 cssa12h12orf10 coding upstream 430452 86883315 ~ 86909700 (+)
LOC110494796 LOC106582661 coding upstream 542271 86781571 ~ 86797881 (+)
LOC110494789 bloc1s1 coding downstream 75262 87415720 ~ 87486890 (+)
LOC110519410 LOC106566157 coding downstream 93253 87433711 ~ 87441188 (+)
LOC110494787 LOC106566158 coding downstream 101381 87441839 ~ 87480286 (+)
LOC110494786 LOC106566159 coding downstream 168451 87508909 ~ 87515178 (+)
LOC110493299 LOC106566196 coding downstream 216338 87556796 ~ 88016164 (+)
G1501171 NA non-coding upstream 98791 87241130 ~ 87241361 (+)
G1501169 NA non-coding upstream 103555 87236383 ~ 87236597 (+)
G1501165 NA non-coding upstream 108530 87231335 ~ 87231622 (+)
G1501156 NA non-coding upstream 149877 87182060 ~ 87190275 (+)
G1501151 NA non-coding upstream 161844 87178070 ~ 87178308 (+)
G1501298 NA non-coding downstream 160782 87501240 ~ 87502220 (+)
G1501305 NA non-coding downstream 185682 87526140 ~ 87527748 (+)
G1501316 NA non-coding downstream 201841 87542299 ~ 87546185 (+)
G1501362 NA non-coding downstream 285705 87626163 ~ 87626792 (+)
G1501436 NA non-coding downstream 455657 87796115 ~ 87796473 (+)
G1501148 NA other upstream 171145 87168539 ~ 87169007 (+)
G1500170 LOC106566147 other upstream 813122 86520830 ~ 86527030 (+)
G1500239 NA other upstream 956607 86382298 ~ 86383545 (+)
G1500198 NA other upstream 1071977 86267328 ~ 86268175 (+)
G1499923 LOC106566127 other upstream 1628293 85625443 ~ 85711859 (+)
LOC110494816 LOC106566192 other downstream 749199 88089634 ~ 88143474 (+)
G1502352 NA other downstream 1429412 88769870 ~ 88800640 (+)
G1502370 NA other downstream 1466520 88806978 ~ 88808969 (+)
LOC110493303 LOC106566213 other downstream 1765713 89106147 ~ 89150807 (+)

Expression


Co-expression Network