G1501437


Basic Information

Item Value
gene id G1501437
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 87797676 ~ 87798273 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1716665
ttattagtcacatgacccgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagacctcacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagaagaccttacagtgaaatgctgaatacaacaggtgtagtagacctcacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatgcaacaggtgtagcattcactctctatccctctctctctatccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1716665 True 370 lncRNA 0.41 2 87797676 87798273

Neighbor

gene id symbol gene type direction distance location
LOC110494786 LOC106566159 coding upstream 282498 87508909 ~ 87515178 (+)
LOC110494787 LOC106566158 coding upstream 317390 87441839 ~ 87480286 (+)
LOC110519410 LOC106566157 coding upstream 356488 87433711 ~ 87441188 (+)
LOC110494789 bloc1s1 coding upstream 365736 87415720 ~ 87486890 (+)
LOC110494792 LOC106566161 coding upstream 543601 87181451 ~ 87254075 (+)
LOC118940111 NA coding downstream 229323 88027596 ~ 88031324 (+)
LOC110493298 LOC106566194 coding downstream 237091 88035364 ~ 88073938 (+)
LOC110494817 LOC100136539 coding downstream 276122 88074395 ~ 88079956 (+)
LOC110494816 LOC106566192 coding downstream 291361 88089634 ~ 88143474 (+)
LOC110494814 LOC106566185 coding downstream 385455 88183728 ~ 88186192 (+)
G1501436 NA non-coding upstream 1203 87796115 ~ 87796473 (+)
G1501362 NA non-coding upstream 170884 87626163 ~ 87626792 (+)
G1501316 NA non-coding upstream 251491 87542299 ~ 87546185 (+)
G1501305 NA non-coding upstream 269928 87526140 ~ 87527748 (+)
G1501298 NA non-coding upstream 295456 87501240 ~ 87502220 (+)
G1501447 NA non-coding downstream 24427 87822700 ~ 87822914 (+)
G1501451 NA non-coding downstream 34557 87832830 ~ 87833174 (+)
G1501464 NA non-coding downstream 60520 87858793 ~ 87859185 (+)
G1501472 NA non-coding downstream 71478 87869751 ~ 87869956 (+)
G1501474 NA non-coding downstream 74326 87872599 ~ 87872856 (+)
G1501148 NA other upstream 628669 87168539 ~ 87169007 (+)
G1500170 LOC106566147 other upstream 1270646 86520830 ~ 86527030 (+)
G1500239 NA other upstream 1414131 86382298 ~ 86383545 (+)
G1500198 NA other upstream 1529501 86267328 ~ 86268175 (+)
G1502352 NA other downstream 971597 88769870 ~ 88800640 (+)
G1502370 NA other downstream 1008705 88806978 ~ 88808969 (+)
LOC110493303 LOC106566213 other downstream 1307898 89106147 ~ 89150807 (+)
G1503119 NA other downstream 1970284 89768557 ~ 89786154 (+)

Expression


Co-expression Network