G1501451


Basic Information

Item Value
gene id G1501451
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 87832830 ~ 87833174 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1716680
TTtcatccaagatcgcatagcagttcagacgtcttttgtcctcgtcttgtcgtgtcctgtatatatatatatttacaacttttttcacatacattttatttttattttccatcaactcatcttctaaacactctcctgcaaccagcctcaccaatttatatttataaaaaagtattatttacctcagatctgcaatccttcaggaagctagccagaaactccaggaggctggccagaaactagccagaagctagccaggagctagcccagaagctaatcagaagctaaccacggtttgtggtcatcggctgtcctttagttcgaaaatctatcgaaaatctatcg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1716680 True 345 lncRNA 0.40 1 87832830 87833174

Neighbor

gene id symbol gene type direction distance location
LOC110494786 LOC106566159 coding upstream 317652 87508909 ~ 87515178 (+)
LOC110494787 LOC106566158 coding upstream 352544 87441839 ~ 87480286 (+)
LOC110519410 LOC106566157 coding upstream 391642 87433711 ~ 87441188 (+)
LOC110494789 bloc1s1 coding upstream 400890 87415720 ~ 87486890 (+)
LOC110494792 LOC106566161 coding upstream 578755 87181451 ~ 87254075 (+)
LOC118940111 NA coding downstream 194422 88027596 ~ 88031324 (+)
LOC110493298 LOC106566194 coding downstream 202190 88035364 ~ 88073938 (+)
LOC110494817 LOC100136539 coding downstream 241221 88074395 ~ 88079956 (+)
LOC110494816 LOC106566192 coding downstream 256460 88089634 ~ 88143474 (+)
LOC110494814 LOC106566185 coding downstream 350554 88183728 ~ 88186192 (+)
G1501447 NA non-coding upstream 9916 87822700 ~ 87822914 (+)
G1501437 NA non-coding upstream 34557 87797676 ~ 87798273 (+)
G1501436 NA non-coding upstream 36357 87796115 ~ 87796473 (+)
G1501362 NA non-coding upstream 206038 87626163 ~ 87626792 (+)
G1501316 NA non-coding upstream 286645 87542299 ~ 87546185 (+)
G1501464 NA non-coding downstream 25619 87858793 ~ 87859185 (+)
G1501472 NA non-coding downstream 36577 87869751 ~ 87869956 (+)
G1501474 NA non-coding downstream 39425 87872599 ~ 87872856 (+)
G1501482 NA non-coding downstream 58000 87891174 ~ 87893210 (+)
G1501513 NA non-coding downstream 193873 88027047 ~ 88027297 (+)
G1501148 NA other upstream 663823 87168539 ~ 87169007 (+)
G1500170 LOC106566147 other upstream 1305800 86520830 ~ 86527030 (+)
G1500239 NA other upstream 1449285 86382298 ~ 86383545 (+)
G1500198 NA other upstream 1564655 86267328 ~ 86268175 (+)
G1502352 NA other downstream 936696 88769870 ~ 88800640 (+)
G1502370 NA other downstream 973804 88806978 ~ 88808969 (+)
LOC110493303 LOC106566213 other downstream 1272997 89106147 ~ 89150807 (+)
G1503119 NA other downstream 1935383 89768557 ~ 89786154 (+)

Expression


Co-expression Network