G1501527


Basic Information

Item Value
gene id G1501527
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 88054209 ~ 88054640 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1716759
GCTCATACTAGACTACCAGGTAATAACCATCCTATTAGTTCTGTCCTGCTCATACTAGACTACCAGGTAATAACCATCCTATTAGTTCTGTCCTGCTCATACTAGACTACCAGGTAATAACCATCCTATAAGTTCTGTCCTGCTCATACTAGACTACCAGGTAATAACCATCCTATTAGTTCTGTCCTGCTCATACTAGACTACCAGGTAATAACCATCCTATTAGTTCTGTCCTGCTCATACTAGACTACCAGGTCATAACCATCCTATTAGTTCTGTCCTGCTCATACTAGACTACCAGGTAATAACCATCCTATTAGTTCTGTCCTGCTCATACTAGACTACCAGGTAATAACCATCCTATTAGTTCTGTCCTGCTCATACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1716759 True 385 lncRNA 0.41 2 88054209 88054640

Neighbor

gene id symbol gene type direction distance location
LOC118940111 NA coding upstream 24407 88027596 ~ 88031324 (+)
LOC110493299 LOC106566196 coding upstream 38045 87556796 ~ 88016164 (+)
LOC110494786 LOC106566159 coding upstream 539031 87508909 ~ 87515178 (+)
LOC110494787 LOC106566158 coding upstream 573923 87441839 ~ 87480286 (+)
LOC110519410 LOC106566157 coding upstream 613021 87433711 ~ 87441188 (+)
LOC110494817 LOC100136539 coding downstream 19755 88074395 ~ 88079956 (+)
LOC110494816 LOC106566192 coding downstream 34994 88089634 ~ 88143474 (+)
LOC110494814 LOC106566185 coding downstream 129088 88183728 ~ 88186192 (+)
LOC110493296 mcm2 coding downstream 131714 88186354 ~ 88200745 (+)
LOC110493295 LOC106566198 coding downstream 149257 88203897 ~ 88233393 (+)
G1501513 NA non-coding upstream 26912 88027047 ~ 88027297 (+)
G1501482 NA non-coding upstream 160999 87891174 ~ 87893210 (+)
G1501474 NA non-coding upstream 181353 87872599 ~ 87872856 (+)
G1501472 NA non-coding upstream 184253 87869751 ~ 87869956 (+)
LOC110493298 LOC106566194 non-coding downstream 14971 88035364 ~ 88073938 (+)
G1501536 NA non-coding downstream 28850 88083490 ~ 88083701 (+)
G1501538 NA non-coding downstream 31286 88085926 ~ 88187504 (+)
G1501543 NA non-coding downstream 44241 88098881 ~ 88102358 (+)
G1501600 NA non-coding downstream 168374 88223014 ~ 88223747 (+)
LOC110494789 bloc1s1 other upstream 567319 87415720 ~ 87486890 (+)
G1501148 NA other upstream 885202 87168539 ~ 87169007 (+)
G1500170 LOC106566147 other upstream 1527179 86520830 ~ 86527030 (+)
G1500239 NA other upstream 1670664 86382298 ~ 86383545 (+)
G1500198 NA other upstream 1786034 86267328 ~ 86268175 (+)
G1502352 NA other downstream 715230 88769870 ~ 88800640 (+)
G1502370 NA other downstream 752338 88806978 ~ 88808969 (+)
LOC110493303 LOC106566213 other downstream 1051531 89106147 ~ 89150807 (+)
G1503119 NA other downstream 1713917 89768557 ~ 89786154 (+)

Expression


Co-expression Network