Gene
RNA
| Item | Value |
|---|---|
| gene id | G1501543 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 88098881 ~ 88102358 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1716791 | True | 334 | lncRNA | 0.37 | 3 | 88098881 | 88102358 |
88,095,000
88,096,000
88,097,000
88,098,000
88,099,000
88,100,000
88,101,000
88,102,000
88,103,000
88,104,000
88,105,000
88,106,000
NC_048581.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494817 | LOC100136539 | coding | upstream | 18925 | 88074395 ~ 88079956 (+) |
| LOC110493298 | LOC106566194 | coding | upstream | 24943 | 88035364 ~ 88073938 (+) |
| LOC118940111 | NA | coding | upstream | 69079 | 88027596 ~ 88031324 (+) |
| LOC110493299 | LOC106566196 | coding | upstream | 82717 | 87556796 ~ 88016164 (+) |
| LOC110494786 | LOC106566159 | coding | upstream | 583703 | 87508909 ~ 87515178 (+) |
| LOC110494814 | LOC106566185 | coding | downstream | 81370 | 88183728 ~ 88186192 (+) |
| LOC110493296 | mcm2 | coding | downstream | 83996 | 88186354 ~ 88200745 (+) |
| LOC110493295 | LOC106566198 | coding | downstream | 101539 | 88203897 ~ 88233393 (+) |
| LOC110493294 | LOC106566182 | coding | downstream | 269720 | 88372078 ~ 88421226 (+) |
| LOC118940509 | NA | coding | downstream | 331990 | 88434348 ~ 88435516 (+) |
| G1501536 | NA | non-coding | upstream | 15180 | 88083490 ~ 88083701 (+) |
| G1501527 | NA | non-coding | upstream | 44241 | 88054209 ~ 88054640 (+) |
| G1501513 | NA | non-coding | upstream | 71584 | 88027047 ~ 88027297 (+) |
| G1501600 | NA | non-coding | downstream | 120656 | 88223014 ~ 88223747 (+) |
| G1501604 | LOC101154678 | non-coding | downstream | 145519 | 88247877 ~ 88248186 (+) |
| G1501611 | NA | non-coding | downstream | 158810 | 88261168 ~ 88261471 (+) |
| G1501585 | NA | non-coding | downstream | 181611 | 88283969 ~ 88292911 (+) |
| LOC110494789 | bloc1s1 | other | upstream | 611991 | 87415720 ~ 87486890 (+) |
| G1501148 | NA | other | upstream | 929874 | 87168539 ~ 87169007 (+) |
| G1500170 | LOC106566147 | other | upstream | 1571851 | 86520830 ~ 86527030 (+) |
| G1500239 | NA | other | upstream | 1715336 | 86382298 ~ 86383545 (+) |
| G1500198 | NA | other | upstream | 1830706 | 86267328 ~ 86268175 (+) |
| G1502352 | NA | other | downstream | 667512 | 88769870 ~ 88800640 (+) |
| G1502370 | NA | other | downstream | 704620 | 88806978 ~ 88808969 (+) |
| LOC110493303 | LOC106566213 | other | downstream | 1003813 | 89106147 ~ 89150807 (+) |
| G1503119 | NA | other | downstream | 1666199 | 89768557 ~ 89786154 (+) |
| G1503337 | NA | other | downstream | 2119187 | 90221545 ~ 90223659 (+) |
