G1502095


Basic Information

Item Value
gene id G1502095
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 88219031 ~ 88219950 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1717443
CCTGCTGTATCTCCTGTGAGAAGTGTGCACCACGGAGGAGCTCTGCCTCCGTTAACAGCTCTTTTCCTCCATGCCTgacctcctgctcctcctcatcatgcttcttttcctcctcctgcctcctctccttctcctggaTCTCCTTCCCAGCGAACATCTCCTCGTCCTCCAGACGGAGCGCTGAATCCTCCGTGACATCGACCGTTGGCGCCAGAGACGCCAAGGGGGCTGTGGTCAGGGGAGAGATGtcacctcctctccctgctcttccCGATTCACTCCTAGGTCTTCCAAGGACCactgcctcctcttcctcttcctcctcctcctcctggtcttCTGTATGGGTGTTGTCCGACTGGAGAGGCCCAAGGCTGGGGAAGACACCTACCTCTGGGAGGGTTGGTCTGGAGGTGGAGGCATCAGGCTCAGGGGTggaactctccctctcctcctcctcctcctcctcctcatctgctACGTCTACCTCCACTGTGTCTTCAGGAGTTGATTGAGAACCCCCGTACACTGGGACGTATTGTGGGTCTAAGGTGGTTGAGTCTACAGGAACCAGAGGGTCAGCAGCAGGGGTTGTGGGGGTGTTGGAggttggggtgGTGGGGGTGTTGGAGGTGGGGGTGTTGGATGTGGTGGTGTTGGATGTGGTGGTGTTGGATGTGGTGGTGTTGGATGTGGTGGTGTTGGAGGTGGTGGTAGGCATGCTCTGGTTCTGGCCGTAGCCAGCCTCCAGGGGGAGGCCGCTggactctctctccatctcccatagCTCCCGCTCCTGCCTCTCCACCGCATCCTTGAAGGGAGAGGTGTGATTACCCTGTCTGGGTTCCTCCATAGGAGAGGTGGAGGTCTGGGAGAGGGTCTGACTG

Function

NR:

description
podocalyxin-like protein 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1717443 True 890 lncRNA 0.59 2 88219031 88219950

Neighbor

gene id symbol gene type direction distance location
LOC110494815 NA coding downstream 35274 88181683 ~ 88183757 (-)
dnsl3 dnsl3 coding downstream 43686 88162116 ~ 88175346 (-)
LOC110493297 LOC106566189 coding downstream 60027 88144616 ~ 88159004 (-)
LOC110495200 LOC106566159 coding downstream 711443 87494104 ~ 87507588 (-)
itga7 LOC106566153 coding downstream 805477 87330714 ~ 87413554 (-)
zgc:171566 LOC106566184 coding upstream 13734 88233684 ~ 88245505 (-)
LOC110494809 LOC106566197 coding upstream 217296 88437246 ~ 88600371 (-)
LOC110493292 NA coding upstream 652970 88872775 ~ 88877452 (-)
LOC118940510 LOC106566201 coding upstream 681908 88901858 ~ 88907675 (-)
pcbp4 LOC106566209 coding upstream 1357622 89575961 ~ 89725809 (-)
G1502063 NA non-coding downstream 75623 88141454 ~ 88143408 (-)
G1502025 NA non-coding downstream 135447 88083384 ~ 88083584 (-)
G1502024 NA non-coding downstream 135925 88082801 ~ 88083106 (-)
G1502010 NA non-coding downstream 139036 88078423 ~ 88079995 (-)
G1502103 NA non-coding upstream 9681 88229631 ~ 88232062 (-)
G1502110 NA non-coding upstream 27443 88247393 ~ 88247610 (-)
G1502111 NA non-coding upstream 27961 88247911 ~ 88248323 (-)
G1502114 NA non-coding upstream 33892 88253842 ~ 88254100 (-)
G1502135 NA non-coding upstream 64039 88283989 ~ 88297048 (-)
G1501745 NA other downstream 823196 87394780 ~ 87395835 (-)
G1501650 LOC106566166 other downstream 1059787 87134058 ~ 87166800 (-)
LOC110493290 map3k12 other downstream 1412500 86798065 ~ 86880836 (-)
G1500834 LOC106566150 other downstream 1768297 86449679 ~ 86450734 (-)
G1502489 NA other upstream 138202 88358152 ~ 88425505 (-)
G1502566 NA other upstream 330416 88550366 ~ 88552831 (-)
G1503624 NA other upstream 1466465 89686415 ~ 89686877 (-)

Expression


Co-expression Network