G1501649


Basic Information

Item Value
gene id G1501649
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 88340414 ~ 88340972 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1716918
GTTTGGGACAGATCTCTGATGAAGGCCAAGAGGCAGAAACAGAAGGCTGTTTGGGACAGATCTCTGATGAAGGCCAAGAGGCAGAAACAGAAGGCTGTTTGGGACAGATCTCTGATGAAGGCCAAGAGGCAGAAACAGAAGGCTTACATAAACAAAGTGATTCTGTCCAGAACAGTTTGCAGGTTTTAAACTTTTCTTTCAGAACTAATGCATGTCTTAACAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1716918 True 223 lncRNA 0.44 2 88340414 88340972

Neighbor

gene id symbol gene type direction distance location
LOC110493295 LOC106566198 coding upstream 107021 88203897 ~ 88233393 (+)
LOC110493296 mcm2 coding upstream 139669 88186354 ~ 88200745 (+)
LOC110494814 LOC106566185 coding upstream 154222 88183728 ~ 88186192 (+)
LOC110494816 LOC106566192 coding upstream 196940 88089634 ~ 88143474 (+)
LOC110494817 LOC100136539 coding upstream 260458 88074395 ~ 88079956 (+)
LOC110493294 LOC106566182 coding downstream 31106 88372078 ~ 88421226 (+)
LOC118940509 NA coding downstream 93376 88434348 ~ 88435516 (+)
LOC118940508 NA coding downstream 94974 88435946 ~ 88436832 (+)
LOC118940163 NA coding downstream 265796 88606768 ~ 88617815 (+)
LOC118940112 NA coding downstream 326073 88667045 ~ 88668051 (+)
G1501647 NA non-coding upstream 3900 88335519 ~ 88336514 (+)
G1501585 NA non-coding upstream 47503 88283969 ~ 88292911 (+)
G1501611 NA non-coding upstream 78943 88261168 ~ 88261471 (+)
G1501604 LOC101154678 non-coding upstream 92228 88247877 ~ 88248186 (+)
G1502171 NA non-coding downstream 5274 88346246 ~ 88346495 (+)
G1502175 NA non-coding downstream 7755 88348727 ~ 88348956 (+)
G1502180 NA non-coding downstream 80529 88421501 ~ 88423482 (+)
G1502212 NA non-coding downstream 117247 88458219 ~ 88458433 (+)
G1502218 NA non-coding downstream 131586 88472558 ~ 88472769 (+)
LOC110494789 bloc1s1 other upstream 853524 87415720 ~ 87486890 (+)
G1501148 NA other upstream 1171407 87168539 ~ 87169007 (+)
G1500170 LOC106566147 other upstream 1813384 86520830 ~ 86527030 (+)
G1500239 NA other upstream 1956869 86382298 ~ 86383545 (+)
G1502352 NA other downstream 428898 88769870 ~ 88800640 (+)
G1502370 NA other downstream 466006 88806978 ~ 88808969 (+)
LOC110493303 LOC106566213 other downstream 765199 89106147 ~ 89150807 (+)
G1503119 NA other downstream 1427585 89768557 ~ 89786154 (+)
G1503337 NA other downstream 1880573 90221545 ~ 90223659 (+)

Expression


Co-expression Network