G1502171


Basic Information

Item Value
gene id G1502171
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 88346246 ~ 88346495 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1717532
GGAAAAGTGGAATCGTGCTTTCTtcagtgatgaatcacgcttcaccatctggcaatccgacGGACGGATAtggatttggtggatgccaggagaatgctctctgccccaatgcatagtgacaactgtaaagttcggtggataaggaataatggtctggggctgtttttcatggttcgggctaggccccttagttccggtgaagggaaatctttgggatgaattggaatgccgactgcgaacatcagtgccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1717532 True 250 lncRNA 0.50 1 88346246 88346495

Neighbor

gene id symbol gene type direction distance location
LOC110493295 LOC106566198 coding upstream 112853 88203897 ~ 88233393 (+)
LOC110493296 mcm2 coding upstream 145501 88186354 ~ 88200745 (+)
LOC110494814 LOC106566185 coding upstream 160054 88183728 ~ 88186192 (+)
LOC110494816 LOC106566192 coding upstream 202772 88089634 ~ 88143474 (+)
LOC110494817 LOC100136539 coding upstream 266290 88074395 ~ 88079956 (+)
LOC110493294 LOC106566182 coding downstream 25583 88372078 ~ 88421226 (+)
LOC118940509 NA coding downstream 87853 88434348 ~ 88435516 (+)
LOC118940508 NA coding downstream 89451 88435946 ~ 88436832 (+)
LOC118940163 NA coding downstream 260273 88606768 ~ 88617815 (+)
LOC118940112 NA coding downstream 320550 88667045 ~ 88668051 (+)
G1501649 NA non-coding upstream 5274 88340414 ~ 88340972 (+)
G1501647 NA non-coding upstream 9732 88335519 ~ 88336514 (+)
G1501585 NA non-coding upstream 53335 88283969 ~ 88292911 (+)
G1501611 NA non-coding upstream 84775 88261168 ~ 88261471 (+)
G1501604 LOC101154678 non-coding upstream 98060 88247877 ~ 88248186 (+)
G1502175 NA non-coding downstream 2232 88348727 ~ 88348956 (+)
G1502180 NA non-coding downstream 75006 88421501 ~ 88423482 (+)
G1502212 NA non-coding downstream 111724 88458219 ~ 88458433 (+)
G1502218 NA non-coding downstream 126063 88472558 ~ 88472769 (+)
G1502220 NA non-coding downstream 129557 88476052 ~ 88476312 (+)
LOC110494789 bloc1s1 other upstream 859356 87415720 ~ 87486890 (+)
G1501148 NA other upstream 1177239 87168539 ~ 87169007 (+)
G1500170 LOC106566147 other upstream 1819216 86520830 ~ 86527030 (+)
G1500239 NA other upstream 1962701 86382298 ~ 86383545 (+)
G1502352 NA other downstream 423375 88769870 ~ 88800640 (+)
G1502370 NA other downstream 460483 88806978 ~ 88808969 (+)
LOC110493303 LOC106566213 other downstream 759676 89106147 ~ 89150807 (+)
G1503119 NA other downstream 1422062 89768557 ~ 89786154 (+)
G1503337 NA other downstream 1875050 90221545 ~ 90223659 (+)

Expression


Co-expression Network