G1502212


Basic Information

Item Value
gene id G1502212
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 88458219 ~ 88458433 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1717588
tgcatattttatgtgattgaaatactatcagcttttataaTGAAGACAGAACCTCTACAGATGGTATCTAATTGAGCAttgcattctctcaagatgcagaAATAAATCATATTTTGGCACTCCTGTTACCAAGTCCAAATTCTGTCTACATTTAggtgtatcattttactgcaagaaacgCTTAATTTTGCAGGAGTTGATATTAAGGCTATGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1717588 True 215 lncRNA 0.33 1 88458219 88458433

Neighbor

gene id symbol gene type direction distance location
LOC118940508 NA coding upstream 21387 88435946 ~ 88436832 (+)
LOC118940509 NA coding upstream 22703 88434348 ~ 88435516 (+)
LOC110493294 LOC106566182 coding upstream 36993 88372078 ~ 88421226 (+)
LOC110493295 LOC106566198 coding upstream 224826 88203897 ~ 88233393 (+)
LOC110493296 mcm2 coding upstream 257474 88186354 ~ 88200745 (+)
LOC118940163 NA coding downstream 148335 88606768 ~ 88617815 (+)
LOC118940112 NA coding downstream 208612 88667045 ~ 88668051 (+)
cand2 LOC106566202 coding downstream 419351 88877784 ~ 88897509 (+)
ssuh2.1 LOC106566200 coding downstream 454463 88912896 ~ 88965638 (+)
LOC110494825 LOC106566214 coding downstream 507414 88965847 ~ 89103615 (+)
G1502180 NA non-coding upstream 34737 88421501 ~ 88423482 (+)
G1502175 NA non-coding upstream 109263 88348727 ~ 88348956 (+)
G1502171 NA non-coding upstream 111724 88346246 ~ 88346495 (+)
G1501649 NA non-coding upstream 117247 88340414 ~ 88340972 (+)
G1501647 NA non-coding upstream 121705 88335519 ~ 88336514 (+)
G1502218 NA non-coding downstream 14125 88472558 ~ 88472769 (+)
G1502220 NA non-coding downstream 17619 88476052 ~ 88476312 (+)
G1502222 NA non-coding downstream 20098 88478531 ~ 88478857 (+)
G1502223 NA non-coding downstream 21521 88479954 ~ 88480242 (+)
G1502229 NA non-coding downstream 32409 88490842 ~ 88541335 (+)
LOC110494816 LOC106566192 other upstream 333345 88089634 ~ 88143474 (+)
LOC110494789 bloc1s1 other upstream 971329 87415720 ~ 87486890 (+)
G1501148 NA other upstream 1289212 87168539 ~ 87169007 (+)
G1500170 LOC106566147 other upstream 1931189 86520830 ~ 86527030 (+)
G1500239 NA other upstream 2074674 86382298 ~ 86383545 (+)
G1502352 NA other downstream 311437 88769870 ~ 88800640 (+)
G1502370 NA other downstream 348545 88806978 ~ 88808969 (+)
LOC110493303 LOC106566213 other downstream 647738 89106147 ~ 89150807 (+)
G1503119 NA other downstream 1310124 89768557 ~ 89786154 (+)
G1503337 NA other downstream 1763112 90221545 ~ 90223659 (+)

Expression


Co-expression Network