G1502220


Basic Information

Item Value
gene id G1502220
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 88476052 ~ 88476312 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1717596
acattactgtctctctctgtaggaggactacattactgtctctctgtaggaggactacattactgtctctctctgtaggaggactacattactgtctctctctgtaggaggactacattactgtctctctctgtaggaggactacattactgtctctctctgtaggaggactacattactgtctctctctgtaggaggactacattactgtctctctctgtaggaggactacattactgtctctctctgtaggaggactac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1717596 True 261 lncRNA 0.45 1 88476052 88476312

Neighbor

gene id symbol gene type direction distance location
LOC118940508 NA coding upstream 39220 88435946 ~ 88436832 (+)
LOC118940509 NA coding upstream 40536 88434348 ~ 88435516 (+)
LOC110493294 LOC106566182 coding upstream 54826 88372078 ~ 88421226 (+)
LOC110493295 LOC106566198 coding upstream 242659 88203897 ~ 88233393 (+)
LOC110493296 mcm2 coding upstream 275307 88186354 ~ 88200745 (+)
LOC118940163 NA coding downstream 130456 88606768 ~ 88617815 (+)
LOC118940112 NA coding downstream 190733 88667045 ~ 88668051 (+)
cand2 LOC106566202 coding downstream 401472 88877784 ~ 88897509 (+)
ssuh2.1 LOC106566200 coding downstream 436584 88912896 ~ 88965638 (+)
LOC110494825 LOC106566214 coding downstream 489535 88965847 ~ 89103615 (+)
G1502218 NA non-coding upstream 3283 88472558 ~ 88472769 (+)
G1502212 NA non-coding upstream 17619 88458219 ~ 88458433 (+)
G1502180 NA non-coding upstream 52570 88421501 ~ 88423482 (+)
G1502175 NA non-coding upstream 127096 88348727 ~ 88348956 (+)
G1502171 NA non-coding upstream 129557 88346246 ~ 88346495 (+)
G1502222 NA non-coding downstream 2219 88478531 ~ 88478857 (+)
G1502223 NA non-coding downstream 3642 88479954 ~ 88480242 (+)
G1502229 NA non-coding downstream 14530 88490842 ~ 88541335 (+)
G1502261 NA non-coding downstream 101648 88577960 ~ 88578193 (+)
G1502279 NA non-coding downstream 153700 88630012 ~ 88630233 (+)
LOC110494816 LOC106566192 other upstream 351178 88089634 ~ 88143474 (+)
LOC110494789 bloc1s1 other upstream 989162 87415720 ~ 87486890 (+)
G1501148 NA other upstream 1307045 87168539 ~ 87169007 (+)
G1500170 LOC106566147 other upstream 1949022 86520830 ~ 86527030 (+)
G1500239 NA other upstream 2092507 86382298 ~ 86383545 (+)
G1502352 NA other downstream 293558 88769870 ~ 88800640 (+)
G1502370 NA other downstream 330666 88806978 ~ 88808969 (+)
LOC110493303 LOC106566213 other downstream 629859 89106147 ~ 89150807 (+)
G1503119 NA other downstream 1292245 89768557 ~ 89786154 (+)
G1503337 NA other downstream 1745233 90221545 ~ 90223659 (+)

Expression


Co-expression Network