G1502222


Basic Information

Item Value
gene id G1502222
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 88478531 ~ 88478857 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1717598
ctctctgtaggaggactacattactgtctctctctgtgggaggactacattactgtctctctctgtgggaggactacattactgtctctctctgtaggaggactacattactgtctctctctcgaaCAATTTAACCCAAGTCATTCATCTGTGGCCTGAACCCATccatactgtacctgtctgtgGCCTGAAGCCACCCATTTtcctgtatcatactgtaccTGTGAGCCATGCTGCCTTTCTTAATGTCTGAGATGATTAACGGCTCTCCAGATTTCTTACTGGCTGTgagggacaggagaagagaggatgaggaggagagaggtc

Function

NR:

description
PREDICTED: glutamate receptor-interacting protein 2 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1717598 True 327 lncRNA 0.48 1 88478531 88478857

Neighbor

gene id symbol gene type direction distance location
LOC118940508 NA coding upstream 41699 88435946 ~ 88436832 (+)
LOC118940509 NA coding upstream 43015 88434348 ~ 88435516 (+)
LOC110493294 LOC106566182 coding upstream 57305 88372078 ~ 88421226 (+)
LOC110493295 LOC106566198 coding upstream 245138 88203897 ~ 88233393 (+)
LOC110493296 mcm2 coding upstream 277786 88186354 ~ 88200745 (+)
LOC118940163 NA coding downstream 127911 88606768 ~ 88617815 (+)
LOC118940112 NA coding downstream 188188 88667045 ~ 88668051 (+)
cand2 LOC106566202 coding downstream 398927 88877784 ~ 88897509 (+)
ssuh2.1 LOC106566200 coding downstream 434039 88912896 ~ 88965638 (+)
LOC110494825 LOC106566214 coding downstream 486990 88965847 ~ 89103615 (+)
G1502220 NA non-coding upstream 2219 88476052 ~ 88476312 (+)
G1502218 NA non-coding upstream 5762 88472558 ~ 88472769 (+)
G1502212 NA non-coding upstream 20098 88458219 ~ 88458433 (+)
G1502180 NA non-coding upstream 55049 88421501 ~ 88423482 (+)
G1502175 NA non-coding upstream 129575 88348727 ~ 88348956 (+)
G1502223 NA non-coding downstream 1097 88479954 ~ 88480242 (+)
G1502229 NA non-coding downstream 11985 88490842 ~ 88541335 (+)
G1502261 NA non-coding downstream 99103 88577960 ~ 88578193 (+)
G1502279 NA non-coding downstream 151155 88630012 ~ 88630233 (+)
G1502287 NA non-coding downstream 162462 88641319 ~ 88641821 (+)
LOC110494816 LOC106566192 other upstream 353657 88089634 ~ 88143474 (+)
LOC110494789 bloc1s1 other upstream 991641 87415720 ~ 87486890 (+)
G1501148 NA other upstream 1309524 87168539 ~ 87169007 (+)
G1500170 LOC106566147 other upstream 1951501 86520830 ~ 86527030 (+)
G1500239 NA other upstream 2094986 86382298 ~ 86383545 (+)
G1502352 NA other downstream 291013 88769870 ~ 88800640 (+)
G1502370 NA other downstream 328121 88806978 ~ 88808969 (+)
LOC110493303 LOC106566213 other downstream 627314 89106147 ~ 89150807 (+)
G1503119 NA other downstream 1289700 89768557 ~ 89786154 (+)
G1503337 NA other downstream 1742688 90221545 ~ 90223659 (+)

Expression


Co-expression Network