G1502223


Basic Information

Item Value
gene id G1502223
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 88479954 ~ 88480242 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1717599
caaagtcaaggtattggagtggccatcacaaagccctgacctcaatcccatagaatatttgtgggcagaactgaaaaagcgtgtgtgagcaaggaggcctacagacctgactcagttacaccagctctgtcaggaggaatgggccaaaattcacccaacttattgtgggaagcttgtggacagctacccgaaacatttgacccaagttaaccaatttaaaggcaatggtaccaaatactaattgagtgtatgtaaacttctgaccctctgggaatgtgatgaaagaaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1717599 True 289 lncRNA 0.44 1 88479954 88480242

Neighbor

gene id symbol gene type direction distance location
LOC118940508 NA coding upstream 43122 88435946 ~ 88436832 (+)
LOC118940509 NA coding upstream 44438 88434348 ~ 88435516 (+)
LOC110493294 LOC106566182 coding upstream 58728 88372078 ~ 88421226 (+)
LOC110493295 LOC106566198 coding upstream 246561 88203897 ~ 88233393 (+)
LOC110493296 mcm2 coding upstream 279209 88186354 ~ 88200745 (+)
LOC118940163 NA coding downstream 126526 88606768 ~ 88617815 (+)
LOC118940112 NA coding downstream 186803 88667045 ~ 88668051 (+)
cand2 LOC106566202 coding downstream 397542 88877784 ~ 88897509 (+)
ssuh2.1 LOC106566200 coding downstream 432654 88912896 ~ 88965638 (+)
LOC110494825 LOC106566214 coding downstream 485605 88965847 ~ 89103615 (+)
G1502222 NA non-coding upstream 1097 88478531 ~ 88478857 (+)
G1502220 NA non-coding upstream 3642 88476052 ~ 88476312 (+)
G1502218 NA non-coding upstream 7185 88472558 ~ 88472769 (+)
G1502212 NA non-coding upstream 21521 88458219 ~ 88458433 (+)
G1502180 NA non-coding upstream 56472 88421501 ~ 88423482 (+)
G1502229 NA non-coding downstream 10600 88490842 ~ 88541335 (+)
G1502261 NA non-coding downstream 97718 88577960 ~ 88578193 (+)
G1502279 NA non-coding downstream 149770 88630012 ~ 88630233 (+)
G1502287 NA non-coding downstream 161077 88641319 ~ 88641821 (+)
G1502288 NA non-coding downstream 162849 88643091 ~ 88643600 (+)
LOC110494816 LOC106566192 other upstream 355080 88089634 ~ 88143474 (+)
LOC110494789 bloc1s1 other upstream 993064 87415720 ~ 87486890 (+)
G1501148 NA other upstream 1310947 87168539 ~ 87169007 (+)
G1500170 LOC106566147 other upstream 1952924 86520830 ~ 86527030 (+)
G1500239 NA other upstream 2096409 86382298 ~ 86383545 (+)
G1502352 NA other downstream 289628 88769870 ~ 88800640 (+)
G1502370 NA other downstream 326736 88806978 ~ 88808969 (+)
LOC110493303 LOC106566213 other downstream 625929 89106147 ~ 89150807 (+)
G1503119 NA other downstream 1288315 89768557 ~ 89786154 (+)
G1503337 NA other downstream 1741303 90221545 ~ 90223659 (+)

Expression


Co-expression Network