Gene
RNA
| Item | Value |
|---|---|
| gene id | G1502588 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 88610712 ~ 88611461 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC111671771 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1718074 | True | 332 | lncRNA | 0.46 | 2 | 88610712 | 88611461 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494809 | LOC106566197 | coding | downstream | 10341 | 88437246 ~ 88600371 (-) |
| zgc:171566 | LOC106566184 | coding | downstream | 365207 | 88233684 ~ 88245505 (-) |
| LOC110494815 | NA | coding | downstream | 426955 | 88181683 ~ 88183757 (-) |
| dnsl3 | dnsl3 | coding | downstream | 435367 | 88162116 ~ 88175346 (-) |
| LOC110493297 | LOC106566189 | coding | downstream | 451708 | 88144616 ~ 88159004 (-) |
| LOC110493292 | NA | coding | upstream | 261459 | 88872775 ~ 88877452 (-) |
| LOC118940510 | LOC106566201 | coding | upstream | 290397 | 88901858 ~ 88907675 (-) |
| pcbp4 | LOC106566209 | coding | upstream | 966111 | 89575961 ~ 89725809 (-) |
| LOC118940164 | NA | coding | upstream | 1188213 | 89799674 ~ 89801444 (-) |
| LOC110494821 | NA | coding | upstream | 1891815 | 90503276 ~ 90504931 (-) |
| G1502587 | NA | non-coding | downstream | 5440 | 88604175 ~ 88605272 (-) |
| G1502576 | NA | non-coding | downstream | 40115 | 88570392 ~ 88570597 (-) |
| G1502561 | NA | non-coding | downstream | 67439 | 88542888 ~ 88543273 (-) |
| G1502539 | NA | non-coding | downstream | 75248 | 88484936 ~ 88535464 (-) |
| G1502537 | NA | non-coding | downstream | 127027 | 88482851 ~ 88483685 (-) |
| G1502599 | NA | non-coding | upstream | 21415 | 88632876 ~ 88633098 (-) |
| G1502603 | NA | non-coding | upstream | 25603 | 88637064 ~ 88638415 (-) |
| G1502606 | NA | non-coding | upstream | 31630 | 88643091 ~ 88643591 (-) |
| G1502608 | NA | non-coding | upstream | 33883 | 88645344 ~ 88646660 (-) |
| G1502610 | NA | non-coding | upstream | 39768 | 88651229 ~ 88651438 (-) |
| G1502566 | NA | other | downstream | 57881 | 88550366 ~ 88552831 (-) |
| G1502489 | NA | other | downstream | 185207 | 88358152 ~ 88425505 (-) |
| G1501745 | NA | other | downstream | 1214877 | 87394780 ~ 87395835 (-) |
| G1501650 | LOC106566166 | other | downstream | 1451468 | 87134058 ~ 87166800 (-) |
| G1503624 | NA | other | upstream | 1074954 | 89686415 ~ 89686877 (-) |
| G1505789 | NA | other | upstream | 3503832 | 92115293 ~ 92170717 (-) |
| G1506160 | NA | other | upstream | 3726592 | 92338053 ~ 92339443 (-) |
