Gene
RNA
| Item | Value |
|---|---|
| gene id | G1502358 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 88775383 ~ 88778280 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1717742 | False | 459 | lncRNA | 0.37 | 3 | 88775383 | 88775931 |
| TU1717743 | True | 232 | lncRNA | 0.38 | 3 | 88775383 | 88778280 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118940112 | NA | coding | upstream | 107332 | 88667045 ~ 88668051 (+) |
| LOC118940163 | NA | coding | upstream | 157568 | 88606768 ~ 88617815 (+) |
| LOC118940508 | NA | coding | upstream | 338551 | 88435946 ~ 88436832 (+) |
| LOC118940509 | NA | coding | upstream | 339867 | 88434348 ~ 88435516 (+) |
| LOC110493294 | LOC106566182 | coding | upstream | 354157 | 88372078 ~ 88421226 (+) |
| cand2 | LOC106566202 | coding | downstream | 99504 | 88877784 ~ 88897509 (+) |
| ssuh2.1 | LOC106566200 | coding | downstream | 134616 | 88912896 ~ 88965638 (+) |
| LOC110494825 | LOC106566214 | coding | downstream | 187567 | 88965847 ~ 89103615 (+) |
| LOC110493303 | LOC106566213 | coding | downstream | 327867 | 89106147 ~ 89150807 (+) |
| LOC110493302 | LOC106583746 | coding | downstream | 384470 | 89162750 ~ 89524314 (+) |
| G1502349 | NA | non-coding | upstream | 7578 | 88767591 ~ 88767805 (+) |
| G1502346 | NA | non-coding | upstream | 10660 | 88764093 ~ 88764723 (+) |
| G1502328 | NA | non-coding | upstream | 52355 | 88722714 ~ 88723028 (+) |
| G1502327 | NA | non-coding | upstream | 54237 | 88720928 ~ 88721146 (+) |
| G1502326 | NA | non-coding | upstream | 55194 | 88719987 ~ 88720189 (+) |
| G1502365 | NA | non-coding | downstream | 12000 | 88790280 ~ 88792314 (+) |
| G1502395 | NA | non-coding | downstream | 94158 | 88872438 ~ 88872830 (+) |
| G1502408 | LOC106583741 | non-coding | downstream | 122904 | 88901184 ~ 88905941 (+) |
| G1502439 | NA | non-coding | downstream | 202380 | 88980660 ~ 88981430 (+) |
| G1502462 | NA | non-coding | downstream | 245676 | 89023956 ~ 89024485 (+) |
| LOC110494816 | LOC106566192 | other | upstream | 650509 | 88089634 ~ 88143474 (+) |
| LOC110494789 | bloc1s1 | other | upstream | 1288493 | 87415720 ~ 87486890 (+) |
| G1501148 | NA | other | upstream | 1606376 | 87168539 ~ 87169007 (+) |
| G1500170 | LOC106566147 | other | upstream | 2248353 | 86520830 ~ 86527030 (+) |
| G1500239 | NA | other | upstream | 2391838 | 86382298 ~ 86383545 (+) |
| G1502370 | NA | other | downstream | 28698 | 88806978 ~ 88808969 (+) |
| G1503119 | NA | other | downstream | 990277 | 89768557 ~ 89786154 (+) |
| G1503337 | NA | other | downstream | 1443265 | 90221545 ~ 90223659 (+) |
| LOC110504503 | LOC106566236 | other | downstream | 3506775 | 92282926 ~ 92317484 (+) |
